RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CFLARO15519 480 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 STX6O43752 255 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 LYPLA1O75608 230 aaPredicted RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 TOXO94900 526 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 IGSF6O95976 241 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 TPM2P07951 284 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 AXLP30530 894 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 CTNNA1P35221 906 aaKnown RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 SSR1P43307 286 aaKnown RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 RPL32P62910 135 aaKnown RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 YWHAHQ04917 246 aaPredicted RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 BNIP1Q12981 228 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ELAVL3Q14576 367 aaKnown RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 GPNMBQ14956 572 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF699Q32M78 642 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 PARP10Q53GL7 1025 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 CYB5R2Q6BCY4 276 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 LINC00696Q6ZRV3 163 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 TEX9Q8N6V9 391 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ARIH2OSQ8N7S6 290 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ARNTL2Q8WYA1 636 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 DCUN1D4Q92564 292 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 RDH5Q92781 318 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 TBC1D31Q96DN5 1066 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 CFAP53Q96M91 514 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 OSBPL8Q9BZF1 889 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ABCG4Q9H172 646 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ABCG8Q9H221 673 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ZCCHC3Q9NUD5 404 aaKnown RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 MBD2Q9UBB5 411 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ONECUT1Q9UBC0 465 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 LHX3Q9UBR4 397 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 MRPS2Q9Y399 296 aaKnown RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 SNX5Q9Y5X3 404 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 MTCL1Q9Y4B5 1905 aaKnown RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 IGKV2D-24A0A075B6R9 120 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 UROSP10746 265 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 RPS2P15880 293 aaKnown RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 CASQ1P31415 396 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 KIF5BP33176 963 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 RFC2P35250 354 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 CD151P48509 253 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 STK19P49842 368 aaPredicted RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 NLRP11P59045 1033 aaKnown RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 IRX3P78415 501 aaPredicted RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 OTUD4Q01804 1114 aaKnown RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 MAP2K1Q02750 393 aaPredicted RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 TEFQ10587 303 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 IFT88Q13099 833 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 SHHQ15465 462 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 PKN2Q16513 984 aaKnown RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 SULT1C3Q6IMI6 304 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 PNCKQ6P2M8 343 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 H1FOOQ8IZA3 346 aaPredicted RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF786Q8N393 782 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 GOT1L1Q8NHS2 421 aaPredicted RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 SNX21Q969T3 373 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 HAVCR1Q96D42 359 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 VMP1Q96GC9 406 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 SPATA17Q96L03 361 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 NXF3Q9H4D5 531 aaKnown RBP1.86□□□□□ -2.11
TRAV40-201ENST00000390467 DBNDD1Q9H9R9 158 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 MARCH5Q9NX47 278 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 EPS15L1Q9UBC2 864 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 MIOXQ9UGB7 285 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 TBK1Q9UHD2 729 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 RABL2BQ9UNT1 228 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 ENTPD4Q9Y227 616 aa1.86□□□□□ -2.11
TRAV40-201ENST00000390467 GPRASP1Q5JY77 1395 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 A0A1B0GUA9 196 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 LRCOL1A6NCL2 159 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 TRIM64A6NGJ6 449 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 TRIM64BA6NI03 449 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 TMEM110-MUSTN1A8MSY1 372 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 H3BMH7 237 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 CHEK1O14757 476 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 CPLX1O14810 134 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF324O75467 553 aaPredicted RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 SUPT7LO94864 414 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 BAG2O95816 211 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 PGK2P07205 417 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 GABRR1P24046 479 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 ANP32AP39687 249 aaKnown RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 TNNT2P45379 298 aaPredicted RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 RPS10P46783 165 aaKnown RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 RPS6P62753 249 aaKnown RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 HMGN5P82970 282 aaKnown RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 UBXN1Q04323 297 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 PPP2R5CQ13362 524 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 SCARB2Q14108 478 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 RAB35Q15286 201 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 UNC5DQ6UXZ4 953 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 HACD2Q6Y1H2 254 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 DPY19L2P2Q6ZN68 376 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 OTUD6AQ7L8S5 288 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 CATSPER4Q7RTX7 472 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 RANBP3LQ86VV4 465 aaPredicted RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 PPP1R27Q86WC6 154 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 ARL10Q8N8L6 244 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 OR8H1Q8NGG4 311 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms