RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SLC25A24Q6NUK1 477 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 CBLN3Q6UW01 205 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 TMEM184AQ6ZMB5 413 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 SUMF1Q8NBK3 374 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZNF671Q8TAW3 534 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 RAB7BQ96AH8 199 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 NTNG2Q96CW9 530 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 TRIM44Q96DX7 344 aaPredicted RBP4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZBED6CLQ96FA7 236 aaPredicted RBP4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 COMMD4Q9H0A8 199 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 DHX33Q9H6R0 707 aaKnown RBP4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 RBM28Q9NW13 759 aaKnown RBP4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 NTNG1Q9Y2I2 539 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 GSAPA4D1B5 854 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 GMFGO60234 142 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 STX11O75558 287 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 MBD3O95983 291 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 WNT2P09544 360 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 H2AFZP0C0S5 128 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ATP6V1C1P21283 382 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ELK3P41970 407 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 IFNAR2P48551 515 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 SLC10A1Q14973 349 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 PPP1R3AQ16821 1122 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 SNAI3Q3KNW1 292 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ASPHD2Q6ICH7 369 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 BLOC1S2Q6QNY1 142 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 PARGQ86W56 976 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 POM121L12Q8N7R1 296 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZNF540Q8NDQ6 660 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 GMCL1P1Q8NEA9 526 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ITLN1Q8WWA0 313 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ADIPOR1Q96A54 375 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 C11orf24Q96F05 449 aaPredicted RBP4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 DHTKD1Q96HY7 919 aaPredicted RBP4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 FEM1AQ9BSK4 669 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 PUS3Q9BZE2 481 aaKnown RBP4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZBP1Q9H171 429 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 CUTCQ9NTM9 273 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZNF446Q9NWS9 450 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 RNF115Q9Y4L5 304 aa4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 DDX49Q9Y6V7 483 aaKnown RBP4.31□□□□□ -1.72
RNU6-40P-201ENST00000384254 H0YCG3 227 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 SDHDO14521 159 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 PI15O43692 258 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 RENP00797 406 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 CGAP01215 116 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 IGHV3-9P01782 118 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 MELTFP08582 738 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 PRG2P13727 222 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 HNRNPA2B1P22626 353 aaKnown RBP4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 HMGCLP35914 325 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 PRELPP51888 382 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 HMGCS2P54868 508 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 RPS6P62753 249 aaKnown RBP4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 BDH1Q02338 343 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 TATDN3Q17R31 274 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 NADK2Q4G0N4 442 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 LGSNQ5TDP6 509 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 NCR3LG1Q68D85 454 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 REG3GQ6UW15 175 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 PRSS48Q7RTY5 328 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 KRTAP7-1Q8IUC3 87 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZSCAN4Q8NAM6 433 aaPredicted RBP4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZNF485Q8NCK3 441 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 FNDC8Q8TC99 324 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 SLC30A2Q9BRI3 323 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 RPP25Q9BUL9 199 aaKnown RBP4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 SLC25A51Q9H1U9 297 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 GNB4Q9HAV0 340 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 IMPAD1Q9NX62 359 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 ELOVL2Q9NXB9 296 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 PAK5Q9P286 719 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 PRODH2Q9UF12 536 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 CRLS1Q9UJA2 301 aa4.3□□□□□ -1.72
RNU6-40P-201ENST00000384254 KIF16BQ96L93 1317 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 PPIAL4CA0A0B4J2A2 164 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 EFCAB7A8K855 629 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 TM9SF1O15321 606 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 TBX19O60806 448 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 RAMP1O60894 148 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 KBTBD11O94819 623 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 PPIAL4GP0DN37 164 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 BCKDHAP12694 445 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 GNPDA1P46926 289 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 ARHGDIBP52566 201 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 SLC8A3P57103 927 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 NTHL1P78549 312 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 PLOD1Q02809 727 aaPredicted RBP4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 SNTB2Q13425 540 aaKnown RBP4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 MAPK6Q16659 721 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 ANKDD1AQ495B1 522 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 DPY19L4Q7Z388 723 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 TMEM17Q86X19 198 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 HIPK1Q86Z02 1210 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 DENND6BQ8NEG7 585 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 OR6T1Q8NGN1 323 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 TFB1MQ8WVM0 346 aaKnown RBP4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 C4orf36Q96KX1 117 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms