RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 HLA-AP01891 365 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 TAP2Q03519 686 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 PDGFRLQ15198 375 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 SF3B4Q15427 424 aaKnown RBP eCLIP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 ENPP7Q6UWV6 458 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 GAREM2Q75VX8 874 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 Q8N9G6 341 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 PLA2G15Q8NCC3 412 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 UHRF1Q96T88 793 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 BRF2Q9HAW0 419 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 EMC7Q9NPA0 242 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 KHNYNO15037 678 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 CBLP22681 906 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 DCTP40126 519 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 SEMG2Q02383 582 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 NLRP8Q86W28 1048 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 MDC1Q14676 2089 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 GLOD5A6NK44 160 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 CLDN7O95471 211 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 RPS17P08708 135 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 POU6F2P78424 691 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 OPCMLQ14982 345 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 TBCEQ15813 527 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 LRRTM4Q86VH4 590 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 IQCF1Q8N6M8 205 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 SFXN5Q8TD22 340 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 DLEC1Q9Y238 1755 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 KNG1P01042 644 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 PITHD1Q9GZP4 211 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 SMOC2Q9H3U7 446 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 NIPAL2Q9H841 368 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 THSD1Q9NS62 852 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 RIPK3Q9Y572 518 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 PCDHGA5Q9Y5G8 931 aa11.81□□□□□ -0.52
SRGAP3-202ENST00000383836 SERPINA7P05543 415 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 CXCL9Q07325 125 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SERINC3Q13530 473 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 ZNF169Q14929 603 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 GRIK5Q16478 980 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 OR10K2Q6IF99 312 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 OR7G3Q8NG95 312 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 OR52E2Q8NGJ4 325 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 HAVCR2Q8TDQ0 301 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 DCAF13Q9NV06 445 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 RIMBP3CA6NJZ7 1639 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 RIMBP3BA6NNM3 1639 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 RIMBP3Q9UFD9 1639 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 GABRB3P28472 473 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 GSTM4Q03013 218 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 LRFN4Q6PJG9 635 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 MOCOSQ96EN8 888 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 LMF1Q96S06 567 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 MCCC2Q9HCC0 563 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 HS3ST4Q9Y661 456 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 RAB40BQ12829 278 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 APOOLQ6UXV4 268 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SKA3Q8IX90 412 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 ZNF578Q96N58 590 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 PSD2Q9BQI7 771 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 KLRF1Q9NZS2 232 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SLC38A8A6NNN8 435 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 C11orf98E9PRG8 122 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 MAGEB4O15481 346 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 PLGP00747 810 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 GNB3P16520 340 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 AKR1C2P52895 323 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 EIF2B1Q14232 305 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 MLIPQ5VWP3 458 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 CLDN19Q8N6F1 224 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 FBRSQ9HAH7 460 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 NACAE9PAV3 2078 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 INHAP05111 366 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 POLR2HP52434 150 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SH3BP2P78314 561 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SGCBQ16585 318 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 PRAMEF19Q5SWL8 479 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 STEAP2Q8NFT2 490 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 OR9Q2Q8NGE9 314 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 TMEM125Q96AQ2 219 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 DNAJC15Q9Y5T4 150 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 ZNF30P17039 623 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 TSSK4Q6SA08 328 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 MAL2Q969L2 176 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 FUBP3Q96I24 572 aaKnown RBP eCLIP11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 SLC30A3Q99726 388 aa11.8□□□□□ -0.52
SRGAP3-202ENST00000383836 OTOL1A6NHN0 477 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 CSNK2A1P68400 391 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 CSNK2A3Q8NEV1 391 aa11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 NUP43Q8NFH3 380 aa11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 OR4D6Q8NGJ1 314 aa11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 GLIS2Q9BZE0 524 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 FAM212BQ9NTI7 297 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 SLIT2O94813 1529 aa11.79□□□□□ -0.52
SRGAP3-202ENST00000383836 GAPDHSO14556 408 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms