RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 MISPQ8IVT2 679 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 DNAJC5GQ8N7S2 189 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 FAM181AQ8N9Y4 354 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 OR52P1PQ8NH57 321 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 FANK1Q8TC84 345 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 BCL7CQ8WUZ0 217 aaPredicted RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 CPPED1Q9BRF8 314 aaPredicted RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 NUDT22Q9BRQ3 303 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 OR51I1Q9H343 314 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 CRLF2Q9HC73 371 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 LANCL2Q9NS86 450 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 CNOT4O95628 575 aaKnown RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 CD1CP29017 333 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 TAS2R38P59533 333 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 BNIP2Q12982 314 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 LY6DQ14210 128 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 AKIRIN2Q53H80 203 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 LRFN4Q6PJG9 635 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 MRGPRGQ86SM5 289 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 RNF130Q86XS8 419 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 KLBQ86Z14 1044 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 OR4F15Q8NGB8 312 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 PATE1Q8WXA2 126 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 CCL19Q99731 98 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 DPH1Q9BZG8 443 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 OR10A4Q9H209 315 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 NDRG4Q9ULP0 352 aaKnown RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 COQ4Q9Y3A0 265 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 OARD1Q9Y530 152 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 FAM172BPA6NC97 362 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 C21orf140B9A014 251 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 IGHV3-9P01782 118 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 NAA10P41227 235 aaPredicted RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 PRPS1P60891 318 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 GLO1Q04760 184 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 LIPEQ05469 1076 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 KLF1Q13351 362 aaPredicted RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 LTC4SQ16873 150 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 ERI1Q8IV48 349 aaKnown RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 KIF2BQ8N4N8 673 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 DUSP19Q8WTR2 217 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 HPS1Q92902 700 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 NRSN2Q9GZP1 204 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 TVP23BQ9NYZ1 205 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 ONECUT1Q9UBC0 465 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 MYOM1P52179 1685 aa8.65□□□□□ -1.02
LIMCH1-202ENST00000381753 SMCO3A2RU48 225 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 A6NIZ1 184 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 TRIM64CA6NLI5 447 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 BBIP1A8MTZ0 92 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 HTR1AP08908 422 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 BCAP31P51572 246 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 RAP1BP61224 184 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 RPS18P62269 152 aaKnown RBP8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 RAP1AP62834 184 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 PITX1P78337 314 aaPredicted RBP8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 C17orf67Q0P5P2 114 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 GGTLC2Q14390 218 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 MREGQ8N565 214 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF441Q8N8Z8 693 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 CDRT4Q8N9R6 151 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 KCNK17Q96T54 332 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 OR10A5Q9H207 317 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 OR10A2Q9H208 303 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 LRRC19Q9H756 370 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 PRAMEF33A0A0G2JMD5 474 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 PCDH17O14917 1159 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 PRAMEF10O60809 474 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC16A8O95907 504 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 ECHS1P30084 290 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 CDK6Q00534 326 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 ISXQ2M1V0 245 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 GPR26Q8NDV2 337 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 OR4K1Q8NGD4 311 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 OR4D9Q8NGE8 314 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 NR4A3Q92570 626 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 FAM173AQ9BQD7 235 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 MGME1Q9BQP7 344 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 MROQ9BYG7 248 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC7A7Q9UM01 511 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 B3GALT1Q9Y5Z6 326 aa8.65□□□□□ -1.03
LIMCH1-202ENST00000381753 J3QRK9 145 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 EIF1BO60739 113 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 CNIH1O95406 144 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 SFTPBP07988 381 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 FPR1P21462 350 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 PSMB5P28074 263 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ACVR1BP36896 505 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 CCR2P41597 374 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC9A3P48764 834 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 CTSCP53634 463 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 EDDM3BP56851 147 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 PSME3P61289 254 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 TGFBIQ15582 683 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF813Q6ZN06 617 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms