RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 C2orf69Q8N8R5 385 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 IL17RDQ8NFM7 739 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 DBF4BQ8NFT6 615 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR6F1Q8NGZ6 308 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 RHOXF1Q8NHV9 184 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ADAMTS14Q8WXS8 1223 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 MUL1Q969V5 352 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 DUS3LQ96G46 650 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 EXOSC3Q9NQT5 275 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 ZNF629Q9UEG4 869 aaPredicted RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 XKRY2A2RUG3 117 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 PRAMEF22A3QJZ6 481 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 J3KR12 359 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 CRHP06850 196 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 EMX2Q04743 252 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ALKBH2Q6NS38 261 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 FBXL16Q8N461 479 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ARV1Q9H2C2 271 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR51I2Q9H344 312 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 HAO2Q9NYQ3 351 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 LNP1A1A4G5 178 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 FFAR2O15552 330 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 KCNK5O95279 499 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ITGB2P05107 769 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 EDNRBP24530 442 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 DMWDQ09019 674 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 MGAT3Q09327 533 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 BAATQ14032 418 aaPredicted RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 CD300LGQ6UXG3 332 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 SLC2A12Q8TD20 617 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 SLC22A18Q96BI1 424 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 STRAPQ9Y3F4 350 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 MPDZO75970 2070 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OLFM2O95897 454 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 GP1BBP13224 206 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR2B8PP59922 312 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR52E8Q6IFG1 317 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 MCATQ8IVS2 390 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 CARFQ8N187 725 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ANKRD9Q96BM1 317 aaPredicted RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 ECHDC3Q96DC8 303 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 EDEM2Q9BV94 578 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 HDHD5Q9BXW7 423 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 DUS2Q9NX74 493 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 CNTN3Q9P232 1028 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 CLCF1Q9UBD9 225 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 CEMIPQ8WUJ3 1361 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 TNS3Q68CZ2 1445 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 TMEM82A0PJX8 343 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR6C75A6NL08 312 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR2F2O95006 317 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 HPNP05981 417 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 HOXA11P31270 313 aaPredicted RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 HOXD13P35453 343 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 GPR143P51810 404 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR2F1Q13607 317 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 EML3Q32P44 896 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 KCTD11Q693B1 232 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 APOOLQ6UXV4 268 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 SYNPRQ8TBG9 265 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 BCL7CQ8WUZ0 217 aaPredicted RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 IL12RB2Q99665 862 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 DUSP9Q99956 384 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 ZDHHC4Q9NPG8 344 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ZCCHC3Q9NUD5 404 aaKnown RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 MIA3Q5JRA6 1907 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 BLOC1S5-TXNDC5H3BN57 136 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 AP1G1O43747 822 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 CKMT1AP12532 417 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 NTF3P20783 257 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 TMEM119Q4V9L6 283 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 SERPINA11Q86U17 422 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ADGRF3Q8IZF5 1079 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ZBTB44Q8NCP5 570 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 FBXO15Q8NCQ5 510 aaPredicted RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR4N2Q8NGD1 307 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 WFIKKN1Q96NZ8 548 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ADAMTS6Q9UKP5 1117 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 A0A1W2PQ09 198 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 STSP08842 583 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 BCL6P41182 706 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 KRTDAPP60985 99 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 GPR176Q14439 515 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 LRRTM1Q86UE6 522 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZNF610Q8N9Z0 462 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR56B1Q8NGI3 324 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SLCO2A1Q92959 643 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 MIB2Q96AX9 1013 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZNF768Q9H5H4 540 aaKnown RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 VRTNQ9H8Y1 702 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 RDH14Q9HBH5 336 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 NLE1Q9NVX2 485 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 UNC119BA6NIH7 251 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 M0R1X1 148 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PIAS1O75925 651 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms