RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 ALG9Q9H6U8 611 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 VCPKMTQ9H867 229 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 ADGRL4Q9HBW9 690 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 NGBQ9NPG2 151 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 ABCC13Q9NSE7 274 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 ZNF446Q9NWS9 450 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 UBAP1Q9NZ09 502 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 EMC3Q9P0I2 261 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 MBD2Q9UBB5 411 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 CIDEBQ9UHD4 219 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 ATPIF1Q9UII2 106 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 CLCA3PQ9Y6N3 262 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 TTC21BQ7Z4L5 1316 aa3.18□□□□□ -1.9
CUBN-201ENST00000377823 NPIPA5A0A0B4J1W7 369 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 GOLGA6L10A6NI86 522 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 NPIPA5E9PKD4 350 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 CYTH3O43739 400 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 STK17BO94768 372 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 TRIM16O95361 564 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 PTBP3O95758 552 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 ECDO95905 644 aaPredicted RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 GOT2P00505 430 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 RENP00797 406 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 MELTFP08582 738 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ZNF3P17036 446 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 PBLDP30039 288 aaPredicted RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 CHRNA3P32297 505 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 SAA4P35542 130 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 SOX6P35712 828 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 LONP1P36776 959 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 CAMLGP49069 296 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 PGFP49763 221 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ZFP36L1Q07352 338 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 MXD4Q14582 209 aaPredicted RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 CEBPEQ15744 281 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ZSWIM7Q19AV6 140 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ZNF699Q32M78 642 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 HHATQ5VTY9 493 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 FAM219BQ5XKK7 198 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 RAET1GQ6H3X3 334 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ZCCHC12Q6PEW1 402 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 RGS9BPQ6ZS82 235 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 MYPOPQ86VE0 399 aaPredicted RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 POM121L12Q8N7R1 296 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 LINC00469Q8N7U9 141 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 OR2L2Q8NH16 312 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 WDR36Q8NI36 951 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 FLVCR1-AS1Q8TAF5 88 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 CCDC110Q8TBZ0 833 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 MRPL38Q96DV4 380 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 CCDC51Q96ER9 411 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 CNOT6LQ96LI5 555 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 CATSPER2Q96P56 530 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 TTYH2Q9BSA4 534 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 THUMPD2Q9BTF0 503 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 APOOQ9BUR5 198 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 PUS3Q9BZE2 481 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 NMNAT2Q9BZQ4 307 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 DPH5Q9H2P9 285 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 XKR8Q9H6D3 395 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 STARD5Q9NSY2 213 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 AATFQ9NY61 560 aaKnown RBP eCLIP3.17□□□□□ -1.9
CUBN-201ENST00000377823 CHMP5Q9NZZ3 219 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ACTR3BQ9P1U1 418 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 RCOR3Q9P2K3 495 aaPredicted RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 MLXQ9UH92 298 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ZNF490Q9ULM2 529 aaPredicted RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 CLEC4AQ9UMR7 237 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 PRELID1Q9Y255 219 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 CHTOPQ9Y3Y2 248 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 KLF2Q9Y5W3 355 aaPredicted RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 FKBP7Q9Y680 259 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 PTPRTO14522 1441 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 ADAMTSL3P82987 1691 aa3.17□□□□□ -1.9
CUBN-201ENST00000377823 PPRC1Q5VV67 1664 aaKnown RBP3.17□□□□□ -1.9
CUBN-201ENST00000377823 GOLGA6L4A6NEF3 574 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 H0YIV9 168 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 GOLGA8SH3BPF8 625 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 RNF113AO15541 343 aaKnown RBP3.16□□□□□ -1.9
CUBN-201ENST00000377823 LRRTM2O43300 516 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 RIPK2O43353 540 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 CRTAPO75718 401 aaPredicted RBP3.16□□□□□ -1.9
CUBN-201ENST00000377823 PDE5AO76074 875 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 NUDT14O95848 222 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 IGHG3P01860 377 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 GATA1P15976 413 aaPredicted RBP3.16□□□□□ -1.9
CUBN-201ENST00000377823 FUT1P19526 365 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 ADSSP30520 456 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 ATP5OP48047 213 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 MFAP2P55001 183 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 VCPP55072 806 aaKnown RBP3.16□□□□□ -1.9
CUBN-201ENST00000377823 ARPC4P59998 168 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 TRA2BP62995 288 aaKnown RBP3.16□□□□□ -1.9
CUBN-201ENST00000377823 HERVK_113P63132 956 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 ERVK-8P63133 956 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 NOP14P78316 857 aaKnown RBP3.16□□□□□ -1.9
CUBN-201ENST00000377823 NAAAQ02083 359 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 SPAG1Q07617 926 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 KLHL30Q0D2K2 578 aa3.16□□□□□ -1.9
CUBN-201ENST00000377823 FUT7Q11130 342 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms