RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 TMEM200CA6NKL6 621 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 HNRNPCL2B2RXH8 293 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 HNRNPCL3B7ZW38 293 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 REM1O75628 298 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 OR2J2O76002 312 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 SERPINA1P01009 418 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 IGKV1D-16P01601 117 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 OPN1SWP03999 348 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 HNRNPCL4P0DMR1 293 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 ITGA3P26006 1051 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 ABCD3P28288 659 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 IL12BP29460 328 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 PSMD4P55036 377 aaKnown RBP11.96□□□□□ -0.49
CBWD3-203ENST00000377344 AP2B1P63010 937 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 LRRC74BQ6ZQY2 392 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 PATL1Q86TB9 770 aaKnown RBP11.96□□□□□ -0.49
CBWD3-203ENST00000377344 SPATA24Q86W54 205 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 SIRT6Q8N6T7 355 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 ZSCAN1Q8NBB4 408 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 COL21A1Q96P44 957 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 QRSL1Q9H0R6 528 aaKnown RBP11.96□□□□□ -0.49
CBWD3-203ENST00000377344 SLC38A1Q9H2H9 487 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 DENND2DQ9H6A0 471 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-203ENST00000377344 GORASP2Q9H8Y8 452 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 RRP15Q9Y3B9 282 aaKnown RBP11.96□□□□□ -0.49
CBWD3-203ENST00000377344 ZNF451Q9Y4E5 1061 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 V9GYQ6 96 aa11.96□□□□□ -0.49
CBWD3-203ENST00000377344 M0QX08 132 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 RRP8O43159 456 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 GCM2O75603 506 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ZNF682O95780 498 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 CDC20Q12834 499 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 CHAF1BQ13112 559 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 AIMP2Q13155 320 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 FLYWCH1Q4VC44 716 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 TYW3Q6IPR3 259 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 LCN8Q6JVE9 175 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 FRRS1Q6ZNA5 592 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 SLC34A3Q8N130 599 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 SLC5A8Q8N695 610 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 SLC22A8Q8TCC7 542 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 BRIX1Q8TDN6 353 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 OMA1Q96E52 524 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ADOQ96SZ5 270 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ZNF350Q9GZX5 532 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 CDCP1Q9H5V8 836 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 CACYBPQ9HB71 228 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ZBTB20Q9HC78 741 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 NPIPA5A0A0B4J1W7 369 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 NPIPA7E9PJI5 369 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 TO15178 435 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ITGA10O75578 1167 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 SERPINB7O75635 380 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 PDE9AO76083 593 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ZIC2O95409 532 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 IFNA14P01570 189 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ALPPP05187 535 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 NPIPA8P0DM63 369 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ST13P50502 369 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 RRADP55042 308 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 PCBP3P57721 371 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ACTR3P61158 418 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 IRAK1BP1Q5VVH5 260 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 PRAMEF8Q5VWM4 474 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 PRAMEF7Q5VXH5 474 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 CCDC80Q76M96 950 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ZAR1Q86SH2 424 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 RPS19BP1Q86WX3 136 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ARMC8Q8IUR7 673 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ZNF614Q8N883 585 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 TMEM102Q8N9M5 508 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 SMYD1Q8NB12 490 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 OR10Q1Q8NGQ4 319 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 FAM110BQ8TC76 370 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 SPPL2AQ8TCT8 520 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 GATA6Q92908 595 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 RSRC1Q96IZ7 334 aaKnown RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 TPD52L3Q96J77 140 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 MTHFD2LQ9H903 347 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-203ENST00000377344 ADPRHL2Q9NX46 363 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 DKK4Q9UBT3 224 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 SEC14L3Q9UDX4 400 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 POLHQ9Y253 713 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 NPFFR2Q9Y5X5 522 aa11.95□□□□□ -0.5
CBWD3-203ENST00000377344 A6NL46 340 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 EFSO43281 561 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 MAN1A2O60476 641 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 ZNF354AO60765 605 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-203ENST00000377344 IL33O95760 270 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 EIF2S3P41091 472 aaKnown RBP11.94□□□□□ -0.5
CBWD3-203ENST00000377344 PSPHP78330 225 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 CCNIQ14094 377 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 DEFB109BQ30KR1 87 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 CYBRD1Q53TN4 286 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 CRB2Q5IJ48 1285 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 B3GNTL1Q67FW5 361 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-203ENST00000377344 CCDC81Q6ZN84 652 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 SPACA3Q8IXA5 215 aa11.94□□□□□ -0.5
CBWD3-203ENST00000377344 PEX5LQ8IYB4 626 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms