RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ABATP80404 500 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 LTB4RQ15722 352 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 AADACL4Q5VUY2 407 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 PSRC1Q6PGN9 363 aaPredicted RBP23.68■■□□□ 1.38
C9orf40-201ENST00000376854 FBXO46Q6PJ61 603 aaPredicted RBP23.68■■□□□ 1.38
C9orf40-201ENST00000376854 PLEKHM3Q6ZWE6 761 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 ACOT11Q8WXI4 607 aaPredicted RBP23.68■■□□□ 1.38
C9orf40-201ENST00000376854 HERVK_113Q902F9 699 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 DEPDC7Q96QD5 511 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 TIMM29Q9BSF4 260 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 TMED9Q9BVK6 235 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 TEX12Q9BXU0 123 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 SYNPO2LQ9H987 977 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 TBC1D17Q9HA65 648 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 SPHK1Q9NYA1 384 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 APOBEC3BQ9UH17 382 aaKnown RBP23.68■■□□□ 1.38
C9orf40-201ENST00000376854 NDRG2Q9UN36 371 aaKnown RBP23.68■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF780BQ9Y6R6 833 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 PRICKLE3O43900 615 aaPredicted RBP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 MYL9P24844 172 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 STAT5AP42229 794 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 GPR4P46093 362 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 RGS8P57771 180 aaPredicted RBP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 COL9A2Q14055 689 aaPredicted RBP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 DSG2Q14126 1118 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 FGL2Q14314 439 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 CST6Q15828 149 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF681Q96N22 645 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 FRMD6Q96NE9 622 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 DCLRE1CQ96SD1 692 aaKnown RBP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 CERS4Q9HA82 394 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 MOSPD1Q9UJG1 213 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF232Q9UNY5 417 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 C2orf16Q68DN1 1984 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 FCMRO60667 390 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 ZIC2O95409 532 aaPredicted RBP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 APEX1P27695 318 aaKnown RBP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 PRKAR1BP31321 381 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 LRRC32Q14392 662 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 DECR1Q16698 335 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 C6orf183Q5T699 404 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 LCN1P1Q5VSP4 162 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 TANGO2Q6ICL3 276 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 SRFBP1Q8NEF9 429 aaKnown RBP23.67■■□□□ 1.38
C9orf40-201ENST00000376854 SLC7A6Q92536 515 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 HDHD5Q9BXW7 423 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 ACTRT3Q9BYD9 372 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 BTBD1Q9H0C5 482 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 RNF121Q9H920 327 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 RWDD3Q9Y3V2 267 aa23.67■■□□□ 1.38
C9orf40-201ENST00000376854 POU2F2P09086 479 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 PEBP1P30086 187 aaKnown RBP23.66■■□□□ 1.38
C9orf40-201ENST00000376854 KIR2DL3P43628 341 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 PDX1P52945 283 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 ARFIP1P53367 373 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 FAM109BQ6ICB4 259 aaPredicted RBP23.66■■□□□ 1.38
C9orf40-201ENST00000376854 NRMQ8IXM6 262 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 HDDC3Q8N4P3 179 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 ENKURQ8TC29 256 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 IL20Q9NYY1 176 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 NUFIP1Q9UHK0 495 aaKnown RBP23.66■■□□□ 1.38
C9orf40-201ENST00000376854 ZFR2Q9UPR6 939 aaKnown RBP23.66■■□□□ 1.38
C9orf40-201ENST00000376854 MYO10Q9HD67 2058 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 A6NL46 340 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 AGRPO00253 132 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 RFXAPO00287 272 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 CELP19835 753 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF155Q12901 538 aaPredicted RBP23.66■■□□□ 1.38
C9orf40-201ENST00000376854 AGERQ15109 404 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 TMEM44Q2T9K0 475 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 CNIH2Q6PI25 160 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 KLHL36Q8N4N3 616 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 ARIH2OSQ8N7S6 290 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 BBS1Q8NFJ9 593 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 GIMAP5Q96F15 307 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 SLC35A4Q96G79 324 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 MCHR1Q99705 422 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 TTYH2Q9BSA4 534 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 IL20RAQ9UHF4 553 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 DPP7Q9UHL4 492 aa23.66■■□□□ 1.38
C9orf40-201ENST00000376854 A0A1W2PP55 124 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 AKAP8O43823 692 aaKnown RBP23.65■■□□□ 1.38
C9orf40-201ENST00000376854 HPGDSO60760 199 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 ASGR2P07307 311 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 SLC2A2P11168 524 aaPredicted RBP23.65■■□□□ 1.38
C9orf40-201ENST00000376854 FCARP24071 287 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 CEBPEQ15744 281 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 PGGHGQ32M88 737 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 GDF7Q7Z4P5 450 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 MARCH9Q86YJ5 346 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 GALNT12Q8IXK2 581 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 MFSD9Q8NBP5 474 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 PHOSPHO2Q8TCD6 241 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 ADAMTS15Q8TE58 950 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 TMEM255BQ8WV15 326 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 CHFRQ96EP1 664 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 SLC41A3Q96GZ6 507 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 TRIM45Q9H8W5 580 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms