RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 EMC8O43402 210 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 NME6O75414 186 aaPredicted RBP13.1□□□□□ -0.31
MSH5-202ENST00000375740 ADORA3P0DMS8 318 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 OSMP13725 252 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 MC3RP41968 323 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 ANXA11P50995 505 aaKnown RBP13.1□□□□□ -0.31
MSH5-202ENST00000375740 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 ALG11Q2TAA5 492 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 NUP43Q8NFH3 380 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 B3GNT7Q8NFL0 401 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 OR56A1Q8NGH5 318 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 SLC7A13Q8TCU3 470 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 FCGR1BQ92637 280 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 KAT2AQ92830 837 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 GAL3ST3Q96A11 431 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 OR5M11Q96RB7 305 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 FUZQ9BT04 418 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 LYARQ9NX58 379 aaKnown RBP13.1□□□□□ -0.31
MSH5-202ENST00000375740 ZNF780BQ9Y6R6 833 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 A0A1W2PQ09 198 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 SMLR1H3BR10 107 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 TPST2O60704 377 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 UGT2B17O75795 530 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 SOX14O95416 240 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 POLR2CP19387 275 aaPredicted RBP13.1□□□□□ -0.31
MSH5-202ENST00000375740 SMIM11AP58511 58 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 PRR5P85299 388 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 COL9A2Q14055 689 aaPredicted RBP13.1□□□□□ -0.31
MSH5-202ENST00000375740 LTB4RQ15722 352 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 TBCEQ15813 527 aaPredicted RBP13.1□□□□□ -0.31
MSH5-202ENST00000375740 PGBD2Q6P3X8 592 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 MOAP1Q96BY2 351 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 OR7D2Q96RA2 312 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 SPATA5L1Q9BVQ7 753 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 C3orf14Q9HBI5 128 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 EQTNQ9NQ60 294 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 RABL2BQ9UNT1 228 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 A0A0G2JPF8 293 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 LRRC72A6NJI9 287 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 HNRNPCL3B7ZW38 293 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 TNFRSF10CO14798 259 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 SLITRK5O94991 958 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 LGI1O95970 557 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 HNRNPCL4P0DMR1 293 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 BUD31P41223 144 aaPredicted RBP13.09□□□□□ -0.31
MSH5-202ENST00000375740 POU6F2P78424 691 aaPredicted RBP13.09□□□□□ -0.31
MSH5-202ENST00000375740 RGS1Q08116 209 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 ILKQ13418 452 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 KIR2DS3Q14952 304 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 CEBPEQ15744 281 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 PODNL1Q6PEZ8 512 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 Q6ZSR6 202 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 FAM46DQ8NEK8 389 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 OR6T1Q8NGN1 323 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 OR10G6Q8NH81 332 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 NT5CQ8TCD5 201 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 ASB15Q8WXK1 588 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 TRMT61AQ96FX7 289 aaKnown RBP13.09□□□□□ -0.31
MSH5-202ENST00000375740 MSLNLQ96KJ4 702 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 CCDC32Q9BV29 185 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 FNDC11Q9BVV2 318 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 BARHL1Q9BZE3 327 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 QRSL1Q9H0R6 528 aaKnown RBP13.09□□□□□ -0.31
MSH5-202ENST00000375740 C6orf106Q9H6K1 298 aaPredicted RBP13.09□□□□□ -0.31
MSH5-202ENST00000375740 C11orf16Q9NQ32 467 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 PCDHGB2Q9Y5G2 931 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 V9GYH0 126 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 FANCMQ8IYD8 2048 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 OR6C74A6NCV1 312 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 CTSVO60911 334 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 DNAJB6O75190 326 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 NR2F6P10588 404 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 UGT2B7P16662 529 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 GABRG2P18507 467 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 POU3F3P20264 500 aaPredicted RBP13.09□□□□□ -0.31
MSH5-202ENST00000375740 FAPQ12884 760 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 TARDBPQ13148 414 aaKnown RBP eCLIP13.09□□□□□ -0.31
MSH5-202ENST00000375740 GNA13Q14344 377 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 FAM205BPQ63HN1 556 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 LAX1Q8IWV1 398 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 YIPF7Q8N8F6 280 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 TMCO6Q96DC7 493 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 TM4SF19Q96DZ7 209 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 OR2A5Q96R48 311 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 IL4I1Q96RQ9 567 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 POLR2J3Q9H1A7 115 aaKnown RBP13.09□□□□□ -0.31
MSH5-202ENST00000375740 CLN6Q9NWW5 311 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 SLC9A8Q9Y2E8 581 aa13.09□□□□□ -0.31
MSH5-202ENST00000375740 GSAPA4D1B5 854 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 TLR4O00206 839 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 MPZL2O60487 215 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 GPR18Q14330 331 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 EOGTQ5NDL2 527 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 FCRL6Q6DN72 434 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms