RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 M0R3H8 397 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 AIFM1O95831 613 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 HNRNPCP07910 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 HSMCR30P0CW71 290 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 PNLIPP16233 465 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 RAB8AP61006 207 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 E2F1Q01094 437 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 PIN1Q13526 163 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 IRF3Q14653 427 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 LASP1Q14847 261 aaKnown RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 INAQ16352 499 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ZNF750Q32MQ0 723 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ARMCX4Q5H9R4 360 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 MRM1Q6IN84 353 aaKnown RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ZNF438Q7Z4V0 828 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ZNF554Q86TJ5 538 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 MFSD9Q8NBP5 474 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 LCN9Q8WX39 176 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ADAMTS14Q8WXS8 1223 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 MOAP1Q96BY2 351 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 IL4I1Q96RQ9 567 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 WFDC6Q9BQY6 131 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 FNDC11Q9BVV2 318 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 SARGQ9BW04 601 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 LRRN3Q9H3W5 708 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 GIMAP4Q9NUV9 329 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 POT1Q9NUX5 634 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 CCDC88CQ9P219 2028 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 HYAL3O43820 417 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 HMGN2P05204 90 aaKnown RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 FHP07954 510 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 C8orf89P0DMQ9 161 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 SPINK2P20155 84 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 UGT2B10P36537 528 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 FEN1P39748 380 aaKnown RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 TSFMP43897 325 aaKnown RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 PSMD7P51665 324 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 XKP51811 444 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 STXBP1P61764 594 aaKnown RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 PRR5P85299 388 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 TARDBPQ13148 414 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 C18orf63Q68DL7 685 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 SLC48A1Q6P1K1 146 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 PGBD2Q6P3X8 592 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 TMEM107Q6UX40 140 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 USP43Q70EL4 1123 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ZNF367Q7RTV3 350 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 AMIGO1Q86WK6 493 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 OR4E2Q8NGC2 313 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 OR56A1Q8NGH5 318 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 MCFD2Q8NI22 146 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 SLC7A13Q8TCU3 470 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 CNRIP1Q96F85 164 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 Q96MT0 163 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 CDCA4Q9BXL8 241 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 POLR2J3Q9H1A7 115 aaKnown RBP14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ARMC7Q9H6L4 198 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 ANKHQ9HCJ1 492 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 BCL2L10Q9HD36 194 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 A4GNTQ9UNA3 340 aa14.53□□□□□ -0.08
CCDC40-202ENST00000374876 IGHV1OR21-1A0A087WYE8 117 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 ZW10O43264 779 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 NME6O75414 186 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-202ENST00000374876 CHRM5P08912 532 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-202ENST00000374876 BMP4P12644 408 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 TYRP1P17643 537 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 CSNK2A2P19784 350 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-202ENST00000374876 CD1CP29017 333 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 MPIP34949 423 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 BUD31P41223 144 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-202ENST00000374876 GPR3P46089 330 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 RGS6P49758 472 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 TGM3Q08188 693 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 GPAT3Q53EU6 434 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 HES3Q5TGS1 186 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 SLX4IPQ5VYV7 408 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 PLAG1Q6DJT9 500 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 CASP12Q6UXS9 341 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 OLIG3Q7RTU3 272 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 TMPRSS9Q7Z410 1059 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 COMTD1Q86VU5 262 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 MFSD4AQ8N468 514 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 SUN3Q8TAQ9 357 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 BTBD2Q9BX70 525 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 ROGDIQ9GZN7 287 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 OR6C2Q9NZP2 312 aa14.52□□□□□ -0.09
CCDC40-202ENST00000374876 A0A0G2JPF8 293 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 LOC100506127A0A0U1RQW1 187 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 A0A1W2PRQ8 180 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 HNRNPCL2B2RXH8 293 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 HNRNPCL3B7ZW38 293 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 AGRPO00253 132 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 KPNA4O00629 521 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 NTN3O00634 580 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 TPST2O60704 377 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 ENTPD6O75354 484 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 CHRM4P08173 479 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 IGFBP1P08833 259 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 HNRNPCL4P0DMR1 293 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 SNRPGP62308 76 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms