RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 FADS1O60427 444 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 ZIC3O60481 467 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 HSPB3Q12988 150 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 MYBPHQ13203 477 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 PDE7AQ13946 482 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 FBXL19-AS1Q494R0 122 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 DDIASQ8IXT1 998 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 CIDECQ96AQ7 238 aaPredicted RBP19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 PPCDCQ96CD2 204 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 TUBA1CQ9BQE3 449 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 PPP4R1LQ9P1A2 415 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 BAIAP2L1Q9UHR4 511 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 DKKL1Q9UK85 242 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 MRTO4Q9UKD2 239 aaKnown RBP19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 ABCG2Q9UNQ0 655 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 C17orf51A8MQB3 221 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 IL33O95760 270 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 DPP4P27487 766 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 PEX19P40855 299 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 FRKP42685 505 aaPredicted RBP19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 STARP49675 285 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 LHX2P50458 406 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 GALNTL6Q49A17 601 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 AAGABQ6PD74 315 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 ADGRE4PQ86SQ3 457 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 CDH24Q86UP0 819 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 FADS6Q8N9I5 356 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 OR4K17Q8NGC6 315 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 CLHC1Q8NHS4 586 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 ZFP28Q8NHY6 868 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 HOXB13Q92826 284 aaPredicted RBP19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 ZBED6CLQ96FA7 236 aaPredicted RBP19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 LRRC46Q96FV0 321 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 SFXN2Q96NB2 322 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 UCN2Q96RP3 112 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 TMEM109Q9BVC6 243 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 C3orf14Q9HBI5 128 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 FAM120CQ9NX05 1096 aaKnown RBP19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 FLRT3Q9NZU0 649 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 SH3BP4Q9P0V3 963 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 POLQO75417 2590 aa19.69■□□□□ 0.74
CCDC28B-201ENST00000373602 CSMD2Q7Z408 3487 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 H0Y3Z8 333 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 PIP5K1BO14986 540 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 SCO2O43819 266 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 SLU7O95391 586 aaKnown RBP19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 IL18BPO95998 194 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 PRPS2P11908 318 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 CREB1P16220 341 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 CHMP24386 653 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 CTSSP25774 331 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 UQCRC1P31930 480 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 ARRB2P32121 409 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 GPC1P35052 558 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 SERPINB5P36952 375 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 MAP3K8P41279 467 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 ASMTP46597 345 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 PSMD4P55036 377 aaKnown RBP19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 DSCR4P56555 118 aaPredicted RBP19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 SRYQ05066 204 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 ZCCHC23Q6ZST2 131 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 C9orf106Q8NAJ2 232 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 OR2M3Q8NG83 312 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 RNASE6Q93091 150 aaKnown RBP19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 MTERF3Q96E29 417 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 G6PC3Q9BUM1 346 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 DSN1Q9H410 356 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 SDHAF3Q9NRP4 125 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 ACSS1Q9NUB1 689 aaPredicted RBP19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 NTMQ9P121 344 aa19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 FOXD3Q9UJU5 478 aaPredicted RBP19.68■□□□□ 0.74
CCDC28B-201ENST00000373602 BCKDHAP12694 445 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 GABRA3P34903 492 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 OPRM1P35372 400 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 MANFP55145 182 aaKnown RBP19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 CLDN18P56856 261 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 B3GALT5-AS1P59052 145 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 SNTB1Q13884 538 aaKnown RBP19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 XKR7Q5GH72 579 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 MREGQ8N565 214 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 OR6Y1Q8NGX8 325 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 CEP70Q8NHQ1 597 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 PPP3R2Q96LZ3 170 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 RTN4RQ9BZR6 473 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 ITGB1BP2Q9UKP3 347 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 RPH3AQ9Y2J0 694 aaPredicted RBP19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 DOCK7Q96N67 2140 aa19.67■□□□□ 0.74
CCDC28B-201ENST00000373602 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 GXYLT2A0PJZ3 443 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 CLCA1A8K7I4 914 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 TYROBPO43914 113 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 NKX2-2O95096 273 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 ZWINTO95229 277 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 BPGMP07738 259 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 ZNF708P17019 499 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 KIR2DL3P43628 341 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 RFX3P48380 749 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 CLK3P49761 638 aaKnown RBP19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 BCL2A1Q16548 175 aa19.66■□□□□ 0.74
CCDC28B-201ENST00000373602 LRIG3Q6UXM1 1119 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms