RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 A0A096LPI6 279 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 RFXANKO14593 260 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 TO15178 435 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 ACOX3O15254 700 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 SP1P08047 785 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 UQCRC2P22695 453 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 PTPN6P29350 595 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 GABRA3P34903 492 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 RFX3P48380 749 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 GPR85P60893 370 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 ZNHIT3Q15649 155 aaPredicted RBP17.04■□□□□ 0.32
CDX4-201ENST00000373514 NTRK2Q16620 822 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 SAXO2Q658L1 398 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 BICRALQ6AI39 1079 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 NANOGP8Q6NSW7 305 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 ZNF621Q6ZSS3 439 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 GALNTL5Q7Z4T8 443 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 SLC15A3Q8IY34 581 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 RNF148Q8N7C7 305 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 CDRT4Q8N9R6 151 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 DNAJB8Q8NHS0 232 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 PNPT1Q8TCS8 783 aaKnown RBP17.04■□□□□ 0.32
CDX4-201ENST00000373514 GPR151Q8TDV0 419 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 CDS1Q92903 461 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 TMEM125Q96AQ2 219 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 MOAP1Q96BY2 351 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 RMND5BQ96G75 393 aaPredicted RBP17.04■□□□□ 0.32
CDX4-201ENST00000373514 AURKBQ96GD4 344 aaPredicted RBP17.04■□□□□ 0.32
CDX4-201ENST00000373514 C5orf34Q96MH7 638 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 TRIM8Q9BZR9 551 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 NANOGQ9H9S0 305 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 DEPPQ9NTK1 212 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 CMTM6Q9NX76 183 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 VAPAQ9P0L0 249 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 ABCD2Q9UBJ2 740 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 VPS4AQ9UN37 437 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 KCNE3Q9Y6H6 103 aa17.04■□□□□ 0.32
CDX4-201ENST00000373514 C15orf38-AP3S2A0A0A6YYH1 394 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 NME4O00746 187 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 NME2P1O60361 137 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 UGT2B11O75310 529 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 PPM1BO75688 479 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 NKX2-2O95096 273 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 HOXB9P17482 250 aaPredicted RBP17.03■□□□□ 0.32
CDX4-201ENST00000373514 NME2P22392 152 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 TRPC1P48995 793 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 PRIM2P49643 509 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 SAMD4BQ5PRF9 694 aaKnown RBP17.03■□□□□ 0.32
CDX4-201ENST00000373514 LRIF1Q5T3J3 769 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 PRAMEF20Q5VT98 475 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 CDC73Q6P1J9 531 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 ANGPTL8Q6UXH0 198 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 RTL4Q6ZR62 310 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 C6orf120Q7Z4R8 191 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 NET1Q7Z628 596 aaPredicted RBP17.03■□□□□ 0.32
CDX4-201ENST00000373514 ARPINQ7Z6K5 226 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 GPALPP1Q8IXQ4 340 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 BCORP1Q8N888 145 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 CCDC124Q96CT7 223 aaKnown RBP17.03■□□□□ 0.32
CDX4-201ENST00000373514 OR7D2Q96RA2 312 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 ACTRT3Q9BYD9 372 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 DENND2DQ9H6A0 471 aaPredicted RBP17.03■□□□□ 0.32
CDX4-201ENST00000373514 Q9N2J8 555 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 SH2D2AQ9NP31 389 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.03■□□□□ 0.32
CDX4-201ENST00000373514 CBLCQ9ULV8 474 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 NTNG1Q9Y2I2 539 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 PCDHB14Q9Y5E9 798 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 CHCHD2Q9Y6H1 151 aaPredicted RBP17.03■□□□□ 0.32
CDX4-201ENST00000373514 SHANK1Q9Y566 2161 aa17.03■□□□□ 0.32
CDX4-201ENST00000373514 CFAP46Q8IYW2 2715 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 TRBV5-3A0A0A0MS03 114 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 PINLYPA6NC86 204 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 TSPAN2O60636 221 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 REM1O75628 298 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 ANP32DO95626 131 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 IGKV1D-16P01601 117 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 CD46P15529 392 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 ME2P23368 584 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 CHI3L1P36222 383 aaPredicted RBP17.02■□□□□ 0.32
CDX4-201ENST00000373514 MAN2A2P49641 1150 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 RABL3Q5HYI8 236 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 CCNJQ5T5M9 372 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 SLC25A25Q6KCM7 469 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 TNFAIP8L2Q6P589 184 aaPredicted RBP17.02■□□□□ 0.32
CDX4-201ENST00000373514 MSRB3Q8IXL7 192 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 HORMAD2Q8N7B1 307 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 WDR60Q8WVS4 1066 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 HGDQ93099 445 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 SLC35A4Q96G79 324 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 NODALQ96S42 347 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 OR51I1Q9H343 314 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 TIMMDC1Q9NPL8 285 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 FBXO34Q9NWN3 711 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 SLC25A37Q9NYZ2 338 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 FLRT3Q9NZU0 649 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 CD300AQ9UGN4 299 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 ANAPC2Q9UJX6 822 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 L3MBTL1Q9Y468 752 aa17.02■□□□□ 0.32
CDX4-201ENST00000373514 SPTA1P02549 2419 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms