RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 FIGNL1Q6PIW4 674 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 BLOC1S3Q6QNY0 202 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 GALNT10Q86SR1 603 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 PACS2Q86VP3 889 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 OR5D16Q8NGK9 328 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 GOT1L1Q8NHS2 421 aaPredicted RBP13.6□□□□□ -0.23
COL9A1-204ENST00000370496 OR7D2Q96RA2 312 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 BARD1Q99728 777 aaKnown RBP13.6□□□□□ -0.23
COL9A1-204ENST00000370496 BTBD2Q9BX70 525 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 PIGUQ9H490 435 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 IL1RL2Q9HB29 575 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 GALNT9Q9HCQ5 603 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 SERHLQ9NQF3 203 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 MRGBPQ9NV56 204 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 SEC14L3Q9UDX4 400 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 NPIPA1Q9UND3 350 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 PCDHGB3Q9Y5G1 929 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 ANKUB1A6NFN9 424 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 CDC40O60508 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL9A1-204ENST00000370496 KCNK2O95069 426 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 SNX4O95219 450 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ATP6V1C1P21283 382 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 MATN1P21941 496 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 MST1P26927 711 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 TDGF1P3P51864 188 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 CASP9P55211 416 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 RNFT1Q5M7Z0 435 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 EXOSC6Q5RKV6 272 aaKnown RBP13.59□□□□□ -0.23
COL9A1-204ENST00000370496 DCST2Q5T1A1 773 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ZNF324BQ6AW86 544 aaPredicted RBP13.59□□□□□ -0.23
COL9A1-204ENST00000370496 SLC30A6Q6NXT4 461 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 TNFAIP8L2Q6P589 184 aaPredicted RBP13.59□□□□□ -0.23
COL9A1-204ENST00000370496 TMEM81Q6P7N7 255 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 SLC2A7Q6PXP3 512 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 GFRALQ6UXV0 394 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 FUNDC1Q8IVP5 155 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 PNPT1Q8TCS8 783 aaKnown RBP13.59□□□□□ -0.23
COL9A1-204ENST00000370496 C10orf82Q8WW14 230 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 NEURL3Q96EH8 262 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 OR51I1Q9H343 314 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ZNF703Q9H7S9 590 aaPredicted RBP13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ZFP64Q9NPA5 681 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 GIN1Q9NXP7 522 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 ABCG2Q9UNQ0 655 aa13.59□□□□□ -0.23
COL9A1-204ENST00000370496 PRRC2CQ9Y520 2896 aaKnown RBP13.59□□□□□ -0.23
COL9A1-204ENST00000370496 LRRC3CA6NJW4 275 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 DUXAA6NLW8 204 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 ANGPT2O15123 496 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 SCO2O43819 266 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 SOX30O94993 753 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 UNC5CO95185 931 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 IGKV1D-16P01601 117 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 CAPN3P20807 821 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 CLK3P49761 638 aaKnown RBP13.58□□□□□ -0.23
COL9A1-204ENST00000370496 ANXA11P50995 505 aaKnown RBP13.58□□□□□ -0.23
COL9A1-204ENST00000370496 SEC24CP53992 1094 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 MRPL49Q13405 166 aaKnown RBP13.58□□□□□ -0.23
COL9A1-204ENST00000370496 SNTA1Q13424 505 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.58□□□□□ -0.23
COL9A1-204ENST00000370496 CCNJQ5T5M9 372 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 ATAD3BQ5T9A4 648 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 C16orf62Q7Z3J2 963 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 SPATA21Q7Z572 469 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 RNF130Q86XS8 419 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 SIAH3Q8IW03 269 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 FAM109AQ8N4B1 249 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 TMEM41AQ96HV5 264 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 GPR137Q96N19 417 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 TBL1XR1Q9BZK7 514 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 SERHL2Q9H4I8 314 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 PROK2Q9HC23 129 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 WIF1Q9Y5W5 379 aa13.58□□□□□ -0.23
COL9A1-204ENST00000370496 A0A096LPI6 279 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 GNB5O14775 395 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 ASNA1O43681 348 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 TRIM3O75382 744 aaPredicted RBP13.58□□□□□ -0.24
COL9A1-204ENST00000370496 GLSO94925 669 aaPredicted RBP13.58□□□□□ -0.24
COL9A1-204ENST00000370496 UTS2O95399 124 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 KRT75O95678 551 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 AGR2O95994 175 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 AK1P00568 194 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 GNLYP22749 145 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
COL9A1-204ENST00000370496 GDF1P27539 372 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 MAGEA5P43359 124 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 UQCRFS1P47985 274 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 TRPC1P48995 793 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 MAN2A2P49641 1150 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 HPCAP84074 193 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 FOXO1Q12778 655 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 STX5Q13190 355 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 UBAP2LQ14157 1087 aaKnown RBP13.58□□□□□ -0.24
COL9A1-204ENST00000370496 BNC2Q6ZN30 1099 aaPredicted RBP13.58□□□□□ -0.24
COL9A1-204ENST00000370496 CPLX4Q7Z7G2 160 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 GHDCQ8N2G8 530 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms