RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 IGLV3-12A0A075B6K2 115 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 IGKV3D-11A0A0A0MRZ8 115 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 A0A0G2JPF8 293 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 NOTOA8MTQ0 251 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 C1QTNF9BB2RNN3 333 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 HNRNPCL2B2RXH8 293 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 HNRNPCL3B7ZW38 293 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 DPM1O60762 260 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SCRG1O75711 98 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 CST1P01037 141 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 MT-ND1P03886 318 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 FABP3P05413 133 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 C1QTNF9P0C862 333 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 HNRNPCL4P0DMR1 293 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 ZNF26P17031 533 aaPredicted RBP11.23□□□□□ -0.61
USF1-203ENST00000368021 MAOAP21397 527 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 S1PR1P21453 382 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 CCKBRP32239 447 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 RORAP35398 523 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 MAP3K8P41279 467 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 PDX1P52945 283 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 FUT5Q11128 374 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SYPL1Q16563 259 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 ISXQ2M1V0 245 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 CCNJQ5T5M9 372 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 CDCP2Q5VXM1 449 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 HEPHL1Q6MZM0 1159 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 PWWP2BQ6NUJ5 590 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 KRT73Q86Y46 540 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 ARMC8Q8IUR7 673 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SLC44A2Q8IWA5 706 aaPredicted RBP11.23□□□□□ -0.61
USF1-203ENST00000368021 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 PACRGLQ8N7B6 248 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 BMPERQ8N8U9 685 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SLC16A11Q8NCK7 471 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.23□□□□□ -0.61
USF1-203ENST00000368021 HOXB13Q92826 284 aaPredicted RBP11.23□□□□□ -0.61
USF1-203ENST00000368021 TPD52L3Q96J77 140 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 STACQ99469 402 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 CIB1Q99828 191 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 YIPF4Q9BSR8 244 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 C9orf16Q9BUW7 83 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 ADAP2Q9NPF8 381 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 PCDHGB3Q9Y5G1 929 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 MYOCOSA0A1B0GUC4 107 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 TRABD2BA6NFA1 517 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 TRIM64CA6NLI5 447 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 JRKO75564 520 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 MFN2O95140 757 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 CBX7O95931 251 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 OPN1SWP03999 348 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 CTAG1AP78358 180 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 IFI44LQ53G44 452 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SFT2D3Q587I9 215 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 DGAT2L6Q6ZPD8 337 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 ZBTB49Q6ZSB9 765 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SLC7A5P1Q8MH63 180 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SIMC1Q8NDZ2 872 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 OR10Q1Q8NGQ4 319 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 LILRB4Q8NHJ6 448 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 GEMIN6Q8WXD5 167 aaKnown RBP11.23□□□□□ -0.61
USF1-203ENST00000368021 TTC9Q92623 222 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SLC35A4Q96G79 324 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 C7orf34Q96L11 122 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 PTCHD1Q96NR3 888 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 DEPDC7Q96QD5 511 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 SPATA5L1Q9BVQ7 753 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 PIGUQ9H490 435 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 RUBCNLQ9H714 662 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 NECTIN3Q9NQS3 549 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 FBXO8Q9NRD0 319 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 OCIAD1Q9NX40 245 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 BAG5Q9UL15 447 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 OAZ3Q9UMX2 235 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 COL27A1Q8IZC6 1860 aaPredicted RBP11.23□□□□□ -0.61
USF1-203ENST00000368021 KIF26BQ2KJY2 2108 aa11.23□□□□□ -0.61
USF1-203ENST00000368021 LOC400499M0QZD8 3231 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 DSPPQ9NZW4 1301 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 PMS2P1A4D2B8 440 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 ANKRD34BA5PLL1 514 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 FAM172BPA6NC97 362 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 EFCAB7A8K855 629 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 MAGEB3O15480 346 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 SULT1C4O75897 302 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 OR6B1O95007 311 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 TIAF1O95411 115 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 AK1P00568 194 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 CHRM4P08173 479 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 AQP4P55087 323 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 DCDP81605 110 aaKnown RBP11.22□□□□□ -0.61
USF1-203ENST00000368021 VLDLRP98155 873 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 RHAGQ02094 409 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 FUT7Q11130 342 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 IQCCQ4KMZ1 466 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 NKAIN1Q4KMZ8 207 aa11.22□□□□□ -0.61
USF1-203ENST00000368021 RPS26P11Q5JNZ5 115 aaPredicted RBP11.22□□□□□ -0.61
USF1-203ENST00000368021 C3orf38Q5JPI3 329 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms