RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SYT4Q9H2B2 425 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 XKR8Q9H6D3 395 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 TAS2R3Q9NYW6 316 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 GPRIN2O60269 458 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 CNMDO75829 334 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 TSFMP43897 325 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 WDR53Q7Z5U6 358 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 ANKRD19PQ9H560 264 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 C2orf42Q9NWW7 574 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 NPIPB15A6NHN6 443 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 P2RX6O15547 441 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 CD70P32970 193 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 CBFBQ13951 182 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZNF169Q14929 603 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 RABEPKQ7Z6M1 372 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 PLPP6Q8IY26 295 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 BEST3Q8N1M1 668 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 GATAD2BQ8WXI9 593 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 ASB15Q8WXK1 588 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 TESQ9UGI8 421 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 KLK4Q9Y5K2 254 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 A0A1W2PP55 124 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 CA5AP35218 305 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 CDKN2CP42773 168 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 PAGE3Q5JUK9 113 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 TMEM236Q5W0B7 351 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 PXKQ7Z7A4 578 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 AMIGO3Q86WK7 504 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 APCDD1Q8J025 514 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR8K5Q8NH50 307 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 ATG5Q9H1Y0 275 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 SLCO3A1Q9UIG8 710 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR6C74A6NCV1 312 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 SPARCP09486 303 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 ATXN1LP0C7T5 689 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 MECP2P51608 486 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 MARCH8Q5T0T0 291 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR51A7Q8NH64 312 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 CHPT1Q8WUD6 406 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 FOXRED1Q96CU9 486 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 PBDC1Q9BVG4 233 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 A0A1B0GVT2 93 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 FUOMA2VDF0 154 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 PAHP00439 452 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 TP53P04637 393 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 DAP3P51398 398 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 EFR3AQ14156 821 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 KLHDC8BQ8IXV7 354 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 ASB17Q8WXJ9 295 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 TMEM121BQ9BXQ6 578 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZNF350Q9GZX5 532 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 CLEC4EQ9ULY5 219 aa11.39□□□□□ -0.59
CDC42BPA-203ENST00000366766 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 DIRAS3O95661 229 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 CHAF1BQ13112 559 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PHF19Q5T6S3 580 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 SLC15A4Q8N697 577 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 TMEM246Q9BRR3 403 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PPP4R1LQ9P1A2 415 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 MGAT4CQ9UBM8 478 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 TCRBV5S1A1TA0A578 114 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 LYRM1O43325 122 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 SYNGR4O95473 234 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 DCAF7P61962 342 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 NCS1P62166 190 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 CRYZQ08257 329 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PMM1Q92871 262 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 TMEM165Q9HC07 324 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 FARSAQ9Y285 508 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PRKAB1Q9Y478 270 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 SEMA3BQ13214 749 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 KIAA1211LQ6NV74 962 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 UTS2BQ765I0 119 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PDZD9Q8IXQ8 264 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 APIPQ96GX9 242 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 DEFB126Q9BYW3 111 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 NRG4Q8WWG1 115 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 ADAMTS14Q8WXS8 1223 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 SRPK3Q9UPE1 567 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 IGLV3-10A0A075B6K4 115 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PTBP1P26599 531 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■■■□ 23
CDC42BPA-203ENST00000366766 RPS5P46782 204 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 OC90Q02509 493 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 APOFQ13790 326 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 OR5J2Q8NH18 312 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 KIAA1143Q96AT1 154 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 C1QTNF2Q9BXJ5 285 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 SMG9Q9H0W8 520 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 GMFGO60234 142 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 RAB40ALP0C0E4 278 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 GABRA5P31644 462 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 GKP32189 559 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 MALLQ13021 153 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 RAB40AQ8WXH6 277 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PHB2Q99623 299 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 PRRT1Q99946 306 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 TREM1Q9NP99 234 aa11.38□□□□□ -0.59
CDC42BPA-203ENST00000366766 CHMP24386 653 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms