RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 FRG2CA6NGY1 282 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ZNF891A8MT65 544 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 A8MVJ9 347 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 MASP2O00187 686 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 CXCR6O00574 342 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ARPC2O15144 300 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ACOX3O15254 700 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 PDE9AO76083 593 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 HPP00738 406 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 C1QCP02747 245 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 CLPSP04118 112 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 NUDT7P0C024 238 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 NR2F1P10589 423 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ACP2P11117 423 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SFTPCP11686 197 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ICAM2P13598 275 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 GGT1P19440 569 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 GABRA3P34903 492 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 TRHRP34981 398 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SOX18P35713 384 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SOX11P35716 441 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 MAN2A2P49641 1150 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 EMDP50402 254 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 GZMMP51124 257 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 PSMD4P55036 377 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 POU6F2P78424 691 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 TRAP1Q12931 704 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 VEZF1Q14119 521 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 MYBPC3Q14896 1274 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 EBPQ15125 230 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ADRM1Q16186 407 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 FXNQ16595 210 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 DUSP5Q16690 384 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 GPAT3Q53EU6 434 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 MTX3Q5HYI7 312 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 DCST2Q5T1A1 773 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 PRAMEF8Q5VWM4 474 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 PRAMEF7Q5VXH5 474 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 PLAG1Q6DJT9 500 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 LCN8Q6JVE9 175 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 REEP3Q6NUK4 255 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 KIRREL2Q6UWL6 708 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 WDR53Q7Z5U6 358 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 DHFR2Q86XF0 187 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 KRT73Q86Y46 540 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 PTOV1Q86YD1 416 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SLC44A2Q8IWA5 706 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 C9orf40Q8IXQ3 194 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 FAM26EQ8N5C1 309 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 METTL25Q8N6Q8 603 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ZNF321PQ8N8H1 164 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SLC16A11Q8NCK7 471 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 APCDD1LQ8NCL9 501 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SIMC1Q8NDZ2 872 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 FAM13CQ8NE31 585 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 C17orf47Q8NEP4 570 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 BHLHE22Q8NFJ8 381 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 OR5L2Q8NGL0 311 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 OR8K3Q8NH51 312 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 NFKBIDQ8NI38 313 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 BBS10Q8TAM1 723 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 NUBPLQ8TB37 319 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 GPR151Q8TDV0 419 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SLC38A5Q8WUX1 472 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 HOXB13Q92826 284 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 CDS1Q92903 461 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 RAB8BQ92930 207 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 POP5Q969H6 163 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 FAM162AQ96A26 154 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 OTUB1Q96FW1 271 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 TMEM19Q96HH6 336 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 NSMCE2Q96MF7 247 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 RNF145Q96MT1 663 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 TRNT1Q96Q11 434 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 NUDT9Q9BW91 350 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 BTBD2Q9BX70 525 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 TRIM45Q9H8W5 580 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ZNF160Q9HCG1 818 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 MMP25Q9NPA2 562 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 P4HTMQ9NXG6 502 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ACTR3BQ9P1U1 418 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 GMPR2Q9P2T1 348 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 PLEKHB1Q9UF11 243 aaPredicted RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 MRTO4Q9UKD2 239 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 POMPQ9Y244 141 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 DTX4Q9Y2E6 619 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 RRP15Q9Y3B9 282 aaKnown RBP6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 OR10H1Q9Y4A9 318 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 KCNMB2Q9Y691 235 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 SHANK1Q9Y566 2161 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 UNC79Q9P2D8 2635 aa6.27□□□□□ -1.41
RNU1-55P-201ENST00000365510 CENPEQ02224 2701 aa6.26□□□□□ -1.41
RNU1-55P-201ENST00000365510 NME6O75414 186 aaPredicted RBP6.26□□□□□ -1.41
RNU1-55P-201ENST00000365510 ZFAND5O76080 213 aa6.26□□□□□ -1.41
RNU1-55P-201ENST00000365510 SORBS2O94875 1100 aaKnown RBP6.26□□□□□ -1.41
RNU1-55P-201ENST00000365510 NKX2-2O95096 273 aa6.26□□□□□ -1.41
RNU1-55P-201ENST00000365510 H6PDO95479 791 aa6.26□□□□□ -1.41
RNU1-55P-201ENST00000365510 IFNA14P01570 189 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms