RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ACVR1BP36896 505 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 MEOX2P50222 304 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 PUDPQ08623 228 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 SERTAD2Q14140 314 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 ADPRMQ3LIE5 342 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 LGSNQ5TDP6 509 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 SLX4IPQ5VYV7 408 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 ZNF57Q68EA5 555 aaPredicted RBP3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 C2orf66Q6UXQ4 117 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 RBM43Q6ZSC3 357 aaKnown RBP3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 C11orf42Q8N5U0 333 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 CNNM3Q8NE01 707 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 OR52B4Q8NGK2 314 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 TFB1MQ8WVM0 346 aaKnown RBP3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 TADA1Q96BN2 335 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 C14orf79Q96F83 325 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 CASD1Q96PB1 797 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 WRAP53Q9BUR4 548 aaKnown RBP3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 TM2D1Q9BX74 207 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 ACTR8Q9H981 624 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 ZNF275Q9NSD4 429 aaPredicted RBP3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 ELOVL2Q9NXB9 296 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 ODF2LQ9ULJ1 636 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 GRIN2DO15399 1336 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 PARD3Q8TEW0 1356 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 PDXKO00764 312 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 APBB3O95704 486 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 JCHAINP01591 159 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 CA3P07451 260 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 ANXA4P09525 319 aaPredicted RBP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 SDC1P18827 310 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 DNAJB1P25685 340 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 PTBP1P26599 531 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 IGLV3-21P80748 117 aaPredicted RBP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 IL9RQ01113 521 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 EXOSC2Q13868 293 aaKnown RBP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 TFDP1Q14186 410 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 TMEM52BQ4KMG9 183 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 PRR30Q53SZ7 412 aaPredicted RBP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 LPCAT2Q7L5N7 544 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 ERASQ7Z444 233 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 PARGQ86W56 976 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 CCDC26Q8TAB7 109 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 ADAMTS16Q8TE57 1224 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 PAXXQ9BUH6 204 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 OPN3Q9H1Y3 402 aaPredicted RBP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 RPAP3Q9H6T3 665 aaPredicted RBP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 GPN2Q9H9Y4 310 aaPredicted RBP3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 B4GALT7Q9UBV7 327 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 CLEC4EQ9ULY5 219 aa3.13□□□□□ -1.91
RNU6-560P-201ENST00000364007 USP6P35125 1406 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 KLF18A0A0U1RQI7 1052 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 WASHC1A8K0Z3 465 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 FAM220BPB1ANY3 271 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 WASH3PC4AMC7 463 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 TM9SF1O15321 606 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 PPIHO43447 177 aaKnown RBP3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 TOM1L1O75674 476 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 RRASP10301 218 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 IL10P22301 178 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 CDH5P33151 784 aaPredicted RBP3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 XCR1P46094 333 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 ASMTP46597 345 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 NOVP48745 357 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 GMFBP60983 142 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 NDPQ00604 133 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 CAMK4Q16566 473 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 CDKN3Q16667 212 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 QRICH1Q2TAL8 776 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 SLC22A10Q63ZE4 541 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 WASH2PQ6VEQ5 465 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 CYS1Q717R9 158 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 SYVN1Q86TM6 617 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 VPS36Q86VN1 386 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 GPR65Q8IYL9 337 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 MCOLN2Q8IZK6 566 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 BCORP1Q8N888 145 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 KCNK16Q96T55 309 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 TBC1D10AQ9BXI6 508 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 ELOVL4Q9GZR5 314 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 EXOSC3Q9NQT5 275 aaKnown RBP3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 C1orf123Q9NWV4 160 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 UTP6Q9NYH9 597 aaKnown RBP3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 HOOK1Q9UJC3 728 aaKnown RBP3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 FOXJ3Q9UPW0 622 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 MOKQ9UQ07 419 aa3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.12□□□□□ -1.91
RNU6-560P-201ENST00000364007 NCAPD2Q15021 1401 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 A0A0U1RQV5 110 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 FAM230AA0A1W2PPH8 454 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 ZSCAN5BA6NJL1 495 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 LATO43561 262 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 NUDT21O43809 227 aaKnown RBP3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 PAICSP22234 425 aaKnown RBP3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 IGHV1-2P23083 117 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 GPC3P51654 580 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 PLOD1Q02809 727 aaPredicted RBP3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 CD47Q08722 323 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 CYBRD1Q53TN4 286 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms