RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 CSNK1G2P78368 415 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 IRF4Q15306 451 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 MZT2BQ6NZ67 158 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 VITQ6UXI7 678 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 KCTD20Q7Z5Y7 419 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 GDPD1Q8N9F7 314 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 ZBTB44Q8NCP5 570 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 BEST4Q8NFU0 473 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 TTC9Q92623 222 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 AIF1LQ9BQI0 150 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 DPH7Q9BTV6 452 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 TBC1D17Q9HA65 648 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 RBFOX1Q9NWB1 397 aaKnown RBP15.2■□□□□ 0.02
IFT140-201ENST00000361339 B3GNT2Q9NY97 397 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 TRPC4Q9UBN4 977 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 NUP50Q9UKX7 468 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 ZFR2Q9UPR6 939 aaKnown RBP15.2■□□□□ 0.02
IFT140-201ENST00000361339 KCNE3Q9Y6H6 103 aa15.2■□□□□ 0.02
IFT140-201ENST00000361339 NDUFS4O43181 175 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 FRS3O43559 492 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 TLX2O43763 284 aaPredicted RBP15.19■□□□□ 0.02
IFT140-201ENST00000361339 FCARP24071 287 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 MLIPQ5VWP3 458 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 PSRC1Q6PGN9 363 aaPredicted RBP15.19■□□□□ 0.02
IFT140-201ENST00000361339 KRT74Q7RTS7 529 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 OR8K5Q8NH50 307 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 SETD7Q8WTS6 366 aaKnown RBP15.19■□□□□ 0.02
IFT140-201ENST00000361339 KLHL6Q8WZ60 621 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 NEURL3Q96EH8 262 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 ZNF514Q96K75 400 aaPredicted RBP15.19■□□□□ 0.02
IFT140-201ENST00000361339 TSSK6Q9BXA6 273 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 EIF3KQ9UBQ5 218 aaKnown RBP15.19■□□□□ 0.02
IFT140-201ENST00000361339 SLC9A8Q9Y2E8 581 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 LOC105369274A0A096LPK9 316 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 HYKKA2RU49 373 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 SLC28A2O43868 658 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 SLC35G4P0C7Q5 338 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 CTRB1P17538 263 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 MAPK9P45984 424 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 ZNF81P51508 661 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 PER3P56645 1201 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 PCBP4P57723 403 aaKnown RBP15.19■□□□□ 0.02
IFT140-201ENST00000361339 CTRB2Q6GPI1 263 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 TEX261Q6UWH6 196 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 TRIM69Q86WT6 500 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 OR4N4Q8N0Y3 316 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 SMPDL3AQ92484 453 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 TMEM80Q96HE8 168 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 KXD1Q9BQD3 176 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 OR51I1Q9H343 314 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 GLIPR2Q9H4G4 154 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 CLEC4AQ9UMR7 237 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 U3KQ87 197 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 LAMA1P25391 3075 aa15.19■□□□□ 0.02
IFT140-201ENST00000361339 ORC5O43913 435 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 OR10H3O60404 316 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 CCR8P51685 355 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 AGFG1P52594 562 aaKnown RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 ABATP80404 500 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 CSTF1Q05048 431 aaKnown RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 C1DQ13901 141 aaKnown RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 GALEQ14376 348 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 NDUFAF5Q5TEU4 345 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 KIAA1211LQ6NV74 962 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 C19orf48Q6RUI8 117 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 HDDC3Q8N4P3 179 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 OR11H4Q8NGC9 324 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 GPA33Q99795 319 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 TREX2Q9BQ50 279 aaPredicted RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 KATNB1Q9BVA0 655 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 TRMT61BQ9BVS5 477 aaKnown RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 GTPBP2Q9BX10 602 aaKnown RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 MED28Q9H204 178 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 SPHK1Q9NYA1 384 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 SCN2AQ99250 2005 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 TRBV23OR9-2A0A075B6M9 112 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 RFPL3O75679 317 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 SERPINI2O75830 405 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 KAT7O95251 611 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 EPPINO95925 133 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 PCSK2P16519 638 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 RHCEP18577 417 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 ELAVL4P26378 380 aaKnown RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 BCL6P41182 706 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 SLC7A13Q8TCU3 470 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 ZG16BQ96DA0 208 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 C16orf58Q96GQ5 468 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 TMED9Q9BVK6 235 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 C12orf10Q9HB07 376 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 REV1Q9UBZ9 1251 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 CA5BQ9Y2D0 317 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 C2orf92A0A1B0GVN3 265 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 TRIM77I1YAP6 450 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 ERGP11308 486 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 SSR2P43308 183 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 VASPP50552 380 aaPredicted RBP15.18■□□□□ 0.02
IFT140-201ENST00000361339 REEP5Q00765 189 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 ZNF91Q05481 1191 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 C18orf63Q68DL7 685 aa15.18■□□□□ 0.02
IFT140-201ENST00000361339 IL20RBQ6UXL0 311 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms