RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 YAP1P46937 504 aaKnown RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF136P52737 540 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 GUSBP11Q6P575 273 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 KLHL17Q6TDP4 642 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 COX18Q8N8Q8 333 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 PLPP5Q8NEB5 264 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 OR9Q2Q8NGE9 314 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 RBM18Q96H35 190 aaKnown RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 TCRBV16S1A1N1A0A5B0 115 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 ARHGAP33O14559 1287 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 OSMP13725 252 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 DRD5P21918 477 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 ARL4DP49703 201 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 BTG2P78543 158 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 EXOSC7Q15024 291 aaKnown RBP15.99■□□□□ 0.15
VPS13B-201ENST00000355155 MEP1AQ16819 746 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 AQP11Q8NBQ7 271 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 SLC7A13Q8TCU3 470 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 APH1BQ8WW43 257 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 NDC1Q9BTX1 674 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 GAREM1Q9H706 876 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 MKKSQ9NPJ1 570 aaPredicted RBP15.99■□□□□ 0.15
VPS13B-201ENST00000355155 PRODH2Q9UF12 536 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 GPR55Q9Y2T6 319 aaPredicted RBP15.99■□□□□ 0.15
VPS13B-201ENST00000355155 CCDC88CQ9P219 2028 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 TECTAO75443 2155 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 NTN3O00634 580 aaPredicted RBP15.99■□□□□ 0.15
VPS13B-201ENST00000355155 GANABQ14697 944 aaKnown RBP15.99■□□□□ 0.15
VPS13B-201ENST00000355155 DECR1Q16698 335 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 BROXQ5VW32 411 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 DEF8Q6ZN54 512 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 OLIG3Q7RTU3 272 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 TMPRSS9Q7Z410 1059 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 CMIPQ8IY22 773 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 ENTHD1Q8IYW4 607 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 DEPDC4Q8N2C3 294 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 Q8N9G6 341 aaPredicted RBP15.99■□□□□ 0.15
VPS13B-201ENST00000355155 RHOXF1Q8NHV9 184 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 UCK2Q9BZX2 261 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 KCNE5Q9UJ90 142 aa15.99■□□□□ 0.15
VPS13B-201ENST00000355155 EPHA2P29317 976 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 PSMD4P55036 377 aaKnown RBP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 PSPHP78330 225 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 TRA2AQ13595 282 aaKnown RBP eCLIP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 TRAM2Q15035 370 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 SYT16Q17RD7 645 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 B3GNT8Q7Z7M8 397 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 MRGPREQ86SM8 312 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 OR52J3Q8NH60 311 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 FNDC11Q9BVV2 318 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF304Q9HCX3 659 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 CEPT1Q9Y6K0 416 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 CDHR4A6H8M9 788 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 WBP4O75554 376 aaKnown RBP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 LYPD3O95274 346 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 IGKV3-11P04433 115 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 SYPP08247 313 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 DUSP3P51452 185 aaPredicted RBP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 CCL7P80098 99 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 ST3GAL3Q11203 375 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 ZNHIT3Q15649 155 aaPredicted RBP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 AMZ1Q400G9 498 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 ZBED5Q49AG3 693 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 C12orf73Q69YU5 71 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 PODNL1Q6PEZ8 512 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 GATAD2AQ86YP4 633 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 GPR135Q8IZ08 494 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 TAGAPQ8N103 731 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 CLIP4Q8N3C7 705 aa15.98■□□□□ 0.15
VPS13B-201ENST00000355155 VANGL1Q8TAA9 524 aaPredicted RBP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 IPCEF1Q8WWN9 437 aaPredicted RBP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 CACYBPQ9HB71 228 aaKnown RBP15.98■□□□□ 0.15
VPS13B-201ENST00000355155 KLF4O43474 513 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 MPZL2O60487 215 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 HTR1AP08908 422 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 GSTM3P21266 225 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 CRISP1P54107 249 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 SLC35A2P78381 396 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF155Q12901 538 aaPredicted RBP15.97■□□□□ 0.15
VPS13B-201ENST00000355155 TUBA3CQ13748 450 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 SLC25A30Q5SVS4 291 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 SLX4IPQ5VYV7 408 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 LAIR1Q6GTX8 287 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 NPSR1Q6W5P4 371 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 PTPMT1Q8WUK0 201 aaPredicted RBP15.97■□□□□ 0.15
VPS13B-201ENST00000355155 QRSL1Q9H0R6 528 aaKnown RBP15.97■□□□□ 0.15
VPS13B-201ENST00000355155 OR10A5Q9H207 317 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 FGF21Q9NSA1 209 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 C14orf105Q9NVL8 296 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 TESQ9UGI8 421 aaKnown RBP15.97■□□□□ 0.15
VPS13B-201ENST00000355155 ADAMTS9Q9P2N4 1935 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 IGHV5-10-1A0A0J9YXX1 117 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 TRIM64BA6NI03 449 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 CYP7B1O75881 506 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 SP9P0CG40 484 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 ATP6V1B1P15313 513 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 FBLP22087 321 aaKnown RBP15.97■□□□□ 0.15
VPS13B-201ENST00000355155 GABRA3P34903 492 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 ADH7P40394 386 aa15.97■□□□□ 0.15
VPS13B-201ENST00000355155 GSSP48637 474 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms