RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 OR51J1Q9H342 316 aa8.83□□□□□ -1
SMG6-202ENST00000354901 ESRP2Q9H6T0 727 aaKnown RBP8.83□□□□□ -1
SMG6-202ENST00000354901 SPHK2Q9NRA0 654 aa8.83□□□□□ -1
SMG6-202ENST00000354901 CTPS2Q9NRF8 586 aa8.83□□□□□ -1
SMG6-202ENST00000354901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.83□□□□□ -1
SMG6-202ENST00000354901 TDP1Q9NUW8 608 aa8.83□□□□□ -1
SMG6-202ENST00000354901 CLN6Q9NWW5 311 aa8.83□□□□□ -1
SMG6-202ENST00000354901 BTNL2Q9UIR0 455 aa8.83□□□□□ -1
SMG6-202ENST00000354901 CACNG2Q9Y698 323 aa8.83□□□□□ -1
SMG6-202ENST00000354901 A0A1W2PRB8 838 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ANKDD1BA6NHY2 528 aa8.82□□□□□ -1
SMG6-202ENST00000354901 NPC1O15118 1278 aa8.82□□□□□ -1
SMG6-202ENST00000354901 GADD45GO95257 159 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ECDO95905 644 aaPredicted RBP8.82□□□□□ -1
SMG6-202ENST00000354901 TIMP1P01033 207 aa8.82□□□□□ -1
SMG6-202ENST00000354901 SERPIND1P05546 499 aa8.82□□□□□ -1
SMG6-202ENST00000354901 NPPBP16860 134 aa8.82□□□□□ -1
SMG6-202ENST00000354901 MVDP53602 400 aa8.82□□□□□ -1
SMG6-202ENST00000354901 TEAD4Q15561 434 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ATAT1Q5SQI0 421 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ELP2Q6IA86 826 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CREB3L4Q8TEY5 395 aa8.82□□□□□ -1
SMG6-202ENST00000354901 C16orf78Q8WTQ4 265 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ERMAPQ96PL5 475 aaPredicted RBP8.82□□□□□ -1
SMG6-202ENST00000354901 PITX2Q99697 317 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CMSS1Q9BQ75 279 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 ADAT1Q9BUB4 502 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 GULP1Q9UBP9 304 aa8.82□□□□□ -1
SMG6-202ENST00000354901 LIPT1Q9Y234 373 aa8.82□□□□□ -1
SMG6-202ENST00000354901 TEX13CA0A0J9YWL9 993 aa8.82□□□□□ -1
SMG6-202ENST00000354901 SLC5A10A0PJK1 596 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ANTXRLA6NF34 631 aa8.82□□□□□ -1
SMG6-202ENST00000354901 HIDE1A8MVS5 230 aa8.82□□□□□ -1
SMG6-202ENST00000354901 L7N2F9 121 aa8.82□□□□□ -1
SMG6-202ENST00000354901 GNB5O14775 395 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ENTPD6O75354 484 aa8.82□□□□□ -1
SMG6-202ENST00000354901 C1orf105O95561 183 aa8.82□□□□□ -1
SMG6-202ENST00000354901 RNF224P0DH78 156 aa8.82□□□□□ -1
SMG6-202ENST00000354901 SYN1P17600 705 aa8.82□□□□□ -1
SMG6-202ENST00000354901 LCN1P31025 176 aa8.82□□□□□ -1
SMG6-202ENST00000354901 KCNJ3P48549 501 aa8.82□□□□□ -1
SMG6-202ENST00000354901 RBBP4Q09028 425 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CNTN1Q12860 1018 aa8.82□□□□□ -1
SMG6-202ENST00000354901 HSPB3Q12988 150 aa8.82□□□□□ -1
SMG6-202ENST00000354901 C1DQ13901 141 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 GPR176Q14439 515 aa8.82□□□□□ -1
SMG6-202ENST00000354901 INSL4Q14641 139 aa8.82□□□□□ -1
SMG6-202ENST00000354901 LTB4RQ15722 352 aa8.82□□□□□ -1
SMG6-202ENST00000354901 BICRALQ6AI39 1079 aa8.82□□□□□ -1
SMG6-202ENST00000354901 C3P1Q6ZMU1 363 aa8.82□□□□□ -1
SMG6-202ENST00000354901 PARS2Q7L3T8 475 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 LIX1LQ8IVB5 337 aa8.82□□□□□ -1
SMG6-202ENST00000354901 VN1R2Q8NFZ6 395 aa8.82□□□□□ -1
SMG6-202ENST00000354901 OR56A3Q8NH54 315 aa8.82□□□□□ -1
SMG6-202ENST00000354901 FCRL1Q96LA6 429 aa8.82□□□□□ -1
SMG6-202ENST00000354901 NELL2Q99435 816 aa8.82□□□□□ -1
SMG6-202ENST00000354901 TMED9Q9BVK6 235 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CHST8Q9H2A9 424 aa8.82□□□□□ -1
SMG6-202ENST00000354901 EXTL2Q9UBQ6 330 aa8.82□□□□□ -1
SMG6-202ENST00000354901 IL36AQ9UHA7 158 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ASF1AQ9Y294 204 aa8.82□□□□□ -1
SMG6-202ENST00000354901 COL4A6Q14031 1691 aa8.82□□□□□ -1
SMG6-202ENST00000354901 LANCL1O43813 399 aa8.82□□□□□ -1
SMG6-202ENST00000354901 UGDHO60701 494 aa8.82□□□□□ -1
SMG6-202ENST00000354901 SLC43A1O75387 559 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CSO75390 466 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 BCHEP06276 602 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CTSAP10619 480 aa8.82□□□□□ -1
SMG6-202ENST00000354901 HOXB6P17509 224 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 PPIBP23284 216 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 CNR2P34972 360 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CCR6P51684 374 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CDC42P60953 191 aa8.82□□□□□ -1
SMG6-202ENST00000354901 OC90Q02509 493 aaPredicted RBP8.82□□□□□ -1
SMG6-202ENST00000354901 OPCMLQ14982 345 aa8.82□□□□□ -1
SMG6-202ENST00000354901 PTGES3Q15185 160 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 NTRK2Q16620 822 aa8.82□□□□□ -1
SMG6-202ENST00000354901 MICAQ29983 383 aa8.82□□□□□ -1
SMG6-202ENST00000354901 OR2G6Q5TZ20 316 aa8.82□□□□□ -1
SMG6-202ENST00000354901 PYHIN1Q6K0P9 492 aa8.82□□□□□ -1
SMG6-202ENST00000354901 ZCCHC12Q6PEW1 402 aa8.82□□□□□ -1
SMG6-202ENST00000354901 CELF5Q8N6W0 485 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 OR4D10Q8NGI6 311 aa8.82□□□□□ -1
SMG6-202ENST00000354901 SORCS2Q96PQ0 1159 aa8.82□□□□□ -1
SMG6-202ENST00000354901 SLC6A16Q9GZN6 736 aa8.82□□□□□ -1
SMG6-202ENST00000354901 SHARPINQ9H0F6 387 aa8.82□□□□□ -1
SMG6-202ENST00000354901 RC3H2Q9HBD1 1191 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 DMRT3Q9NQL9 472 aa8.82□□□□□ -1
SMG6-202ENST00000354901 TXNL4BQ9NX01 149 aaKnown RBP8.82□□□□□ -1
SMG6-202ENST00000354901 STUB1Q9UNE7 303 aa8.82□□□□□ -1
SMG6-202ENST00000354901 C2orf92A0A1B0GVN3 265 aa8.81□□□□□ -1
SMG6-202ENST00000354901 C5orf58C9J3I9 102 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ZNF670-ZNF695F2Z2N8 137 aa8.81□□□□□ -1
SMG6-202ENST00000354901 RNASET2O00584 256 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 GASTP01350 101 aa8.81□□□□□ -1
SMG6-202ENST00000354901 FURINP09958 794 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ANXA8P13928 327 aa8.81□□□□□ -1
SMG6-202ENST00000354901 GPR1P46091 355 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PRLHRP49683 370 aa8.81□□□□□ -1
SMG6-202ENST00000354901 CAPZA1P52907 286 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms