RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 WDR77Q9BQA1 342 aaPredicted RBP14.45□□□□□ -0.1
CTSA-202ENST00000354880 KLHL4Q9C0H6 718 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 TRIM45Q9H8W5 580 aaPredicted RBP14.45□□□□□ -0.1
CTSA-202ENST00000354880 POLE3Q9NRF9 147 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 CBLCQ9ULV8 474 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 ABCG2Q9UNQ0 655 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 OR10H1Q9Y4A9 318 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 AHCTF1Q8WYP5 2266 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 C2orf92A0A1B0GVN3 265 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 GNGT2O14610 69 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 PEX1O43933 1283 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 KIAA0513O60268 411 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 PRSS23O95084 383 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 TCN2P20062 427 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 RFX3P48380 749 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 DCAF7P61962 342 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 KCNC4Q03721 635 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 PUM1Q14671 1186 aaKnown RBP eCLIP14.45□□□□□ -0.1
CTSA-202ENST00000354880 EBPQ15125 230 aaKnown RBP14.45□□□□□ -0.1
CTSA-202ENST00000354880 IQCCQ4KMZ1 466 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 ZNF311Q5JNZ3 666 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 PEX5LQ8IYB4 626 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 ESX1Q8N693 406 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 APCDD1LQ8NCL9 501 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 NFAM1Q8NET5 270 aaPredicted RBP14.45□□□□□ -0.1
CTSA-202ENST00000354880 OR52P1PQ8NH57 321 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 APOBEC4Q8WW27 367 aaKnown RBP14.45□□□□□ -0.1
CTSA-202ENST00000354880 ADIPOR1Q96A54 375 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 GAL3ST4Q96RP7 486 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 CIB1Q99828 191 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 PINK1Q9BXM7 581 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 SEMA4CQ9C0C4 833 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 B3GNT4Q9C0J1 378 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 NTN4Q9HB63 628 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 CACYBPQ9HB71 228 aaKnown RBP14.45□□□□□ -0.1
CTSA-202ENST00000354880 PPIEQ9UNP9 301 aaKnown RBP14.45□□□□□ -0.1
CTSA-202ENST00000354880 IFT52Q9Y366 437 aa14.45□□□□□ -0.1
CTSA-202ENST00000354880 LOC102723996A0A087X1L8 192 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 PRAMEF25A6NGN4 478 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 FRG2CA6NGY1 282 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 SEC24DO94855 1032 aaPredicted RBP14.44□□□□□ -0.1
CTSA-202ENST00000354880 DIRAS1O95057 198 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 IFNW1P05000 195 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 GUSBP08236 651 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 RAB40ALP0C0E4 278 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 ITGA2P17301 1181 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 ATP6V1C1P21283 382 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 FOLR3P41439 243 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 HLA-DQA1Q5Y7H0 255 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 VRK2Q86Y07 508 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 ZSCAN1Q8NBB4 408 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 CT55Q8WUE5 264 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 LCORQ96JN0 433 aaPredicted RBP14.44□□□□□ -0.1
CTSA-202ENST00000354880 G6PC3Q9BUM1 346 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 NXF5Q9H1B4 397 aaKnown RBP14.44□□□□□ -0.1
CTSA-202ENST00000354880 THSD1Q9NS62 852 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 NDUFAF4Q9P032 175 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 OAZ3Q9UMX2 235 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 ZNF232Q9UNY5 417 aa14.44□□□□□ -0.1
CTSA-202ENST00000354880 AGAP5A6NIR3 686 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 SAC3D1A6NKF1 404 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 SLC30A4O14863 429 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 PCDH17O14917 1159 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 IGKV1D-16P01601 117 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 IL7RP16871 459 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 DRD5P21918 477 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 RPS4Y1P22090 263 aaKnown RBP14.43□□□□□ -0.1
CTSA-202ENST00000354880 PRKAR1BP31321 381 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 LARS2Q15031 903 aaKnown RBP14.43□□□□□ -0.1
CTSA-202ENST00000354880 FLYWCH1Q4VC44 716 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 OR2T5Q6IEZ7 315 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 TSEN54Q7Z6J9 526 aaKnown RBP14.43□□□□□ -0.1
CTSA-202ENST00000354880 BCORP1Q8N888 145 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 OR2T29Q8NH02 315 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 TMBIM1Q969X1 311 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 AMBRA1Q9C0C7 1298 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 WWTR1Q9GZV5 400 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 POLR1BQ9H9Y6 1135 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 DTNAQ9Y4J8 743 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 SYT5O00445 386 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 PRKNO60260 465 aaPredicted RBP14.43□□□□□ -0.1
CTSA-202ENST00000354880 LGI1O95970 557 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 DBIP07108 87 aaKnown RBP14.43□□□□□ -0.1
CTSA-202ENST00000354880 THBS1P07996 1170 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 ZNF23P17027 643 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 DECR1Q16698 335 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 DHRS4L2Q6PKH6 230 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 IZUMO2Q6UXV1 221 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 HSDL2Q6YN16 418 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 ZAR1Q86SH2 424 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 CARM1Q86X55 608 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 MARCH9Q86YJ5 346 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 EPHX4Q8IUS5 362 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 NLGN4XQ8N0W4 816 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 GALNT15Q8N3T1 639 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 C17orf47Q8NEP4 570 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 NLGN4YQ8NFZ3 816 aaPredicted RBP14.43□□□□□ -0.1
CTSA-202ENST00000354880 VMP1Q96GC9 406 aa14.43□□□□□ -0.1
CTSA-202ENST00000354880 ZNF300Q96RE9 604 aaPredicted RBP14.43□□□□□ -0.1
CTSA-202ENST00000354880 ZNF347Q96SE7 839 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms