RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 RNF19AQ9NV58 838 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 GPATCH2Q9NW75 528 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 VPS29Q9UBQ0 182 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ATXN7L1Q9ULK2 861 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 SLC22A31A6NKX4 558 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 AGPAT2O15120 278 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 RNF13O43567 381 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PTHP01270 115 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PIPP12273 146 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 ZNF10P21506 573 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 PIGAP37287 484 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PRKAG1P54619 331 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GUK1Q16774 197 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NXNL2Q5VZ03 156 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR4F3Q6IEY1 312 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 KIAA1211LQ6NV74 962 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 UBE2R2Q712K3 238 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 LRRTM3Q86VH5 581 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 LIX1LQ8IVB5 337 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ZNF676Q8N7Q3 588 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR2T4Q8NH00 348 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 RAET1EQ8TD07 263 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ZNF668Q96K58 619 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 LINC00052Q96N35 136 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CD180Q99467 661 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TBX5Q99593 518 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CDCA4Q9BXL8 241 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PXMP2Q9NR77 195 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 MYLKQ15746 1914 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TET1Q8NFU7 2136 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 LGALS8O00214 317 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ABCD4O14678 606 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TSPAN3O60637 253 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 LAMP2P13473 410 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GPR176Q14439 515 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ZMAT1Q5H9K5 638 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 LYPD8Q6UX82 237 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TMEM86AQ8N2M4 240 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR56B1Q8NGI3 324 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR5M3Q8NGP4 307 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TRAPPC12Q8WVT3 735 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 XAGE5Q8WWM1 108 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 HLA-CQ95604 372 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PHYHIPLQ96FC7 376 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SCMH1Q96GD3 660 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NTPCRQ9BSD7 190 aaKnown RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 ACSS1Q9NUB1 689 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 LSM7Q9UK45 103 aaKnown RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 GPR45Q9Y5Y3 372 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PCNX1Q96RV3 2341 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ELOA3CA0A087WX78 387 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 C17orf113A0A1B0GUU1 675 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TRDV1A0A1B0GX56 115 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ERVH48-1M5A8F1 160 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SLC31A2O15432 143 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 MC3RP41968 323 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 MTNR1BP49286 362 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NRLP54845 237 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CDK3Q00526 305 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 MAP4K2Q12851 820 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CRY2Q49AN0 593 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GXYLT1Q4G148 440 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 FBXO48Q5FWF7 155 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 RNASE10Q5GAN6 216 aaKnown RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 GLT8D1Q68CQ7 371 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NETO2Q8NC67 525 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ADPRHL1Q8NDY3 354 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR52P1PQ8NH57 321 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NFKBIDQ8NI38 313 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 MFRPQ9BY79 579 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 BABAM2Q9NXR7 383 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GALPQ9UBC7 116 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ELF5Q9UKW6 265 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 ZMIZ1Q9ULJ6 1067 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 COL1A1P02452 1464 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 A0A1B0GUH1 482 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GAPDHSO14556 408 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 YY2O15391 372 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CD3GP09693 182 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 USP17L7P0C7H9 530 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 IFNGR1P15260 489 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NQO2P16083 231 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 AHCYP23526 432 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GABRR2P28476 465 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CCR4P51679 360 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CACNB3P54284 484 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 MLLT10P55197 1068 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR2B8PP59922 312 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 UBE2IP63279 158 aaKnown RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 GAS6Q14393 721 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SMN1Q16637 294 aaKnown RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 C3orf38Q5JPI3 329 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR4E2Q8NGC2 313 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TMEM18Q96B42 140 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 FBXL18Q96ME1 805 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CLCC1Q96S66 551 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ACO2Q99798 780 aaKnown RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 MYOCQ99972 504 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 WDR18Q9BV38 432 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms