RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ZNF300Q96RE9 604 aaPredicted RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 TSC22D3Q99576 134 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 PITX2Q99697 317 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 GABARAPL3Q9BY60 117 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 YIPF3Q9GZM5 350 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ING2Q9H160 280 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 GLIPR2Q9H4G4 154 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 KLHL31Q9H511 634 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 ACTR10Q9NZ32 417 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 NDUFAF4Q9P032 175 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 P2RX2Q9UBL9 471 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 PHF11Q9UIL8 331 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 BLOC1S6Q9UL45 172 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 SAMHD1Q9Y3Z3 626 aaKnown RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 PCDHGA6Q9Y5G7 932 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 MAGED1Q9Y5V3 778 aaPredicted RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 LYVE1Q9Y5Y7 322 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 COMMD3-BMI1R4GMX3 469 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 MEGF8Q7Z7M0 2845 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 NUP214P35658 2090 aaPredicted RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 MDC1Q14676 2089 aaKnown RBP7.66□□□□□ -1.18
CD44-205ENST00000352818 AKAP6Q13023 2319 aa7.66□□□□□ -1.18
CD44-205ENST00000352818 A0A0J9YY10 115 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 LOC100130705A0A1B0GUX0 176 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 A0A1W2PR48 441 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 TMEM247A6NEH6 219 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 B4DGG1 531 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 M0QX08 132 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 HMGN4O00479 90 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 BCKDKO14874 412 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 PROM1O43490 865 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ASNA1O43681 348 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 AHCYL1O43865 530 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 CLIC3O95833 236 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 VIPP01282 170 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 TFPTP0C1Z6 253 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 NR2F6P10588 404 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 FOSL1P15407 271 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 JUNBP17275 347 aaPredicted RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 CSNK2A2P19784 350 aaPredicted RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 CD247P20963 164 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ZNF10P21506 573 aaPredicted RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 CERS1P27544 350 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 PIGAP37287 484 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 XCR1P46094 333 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 LIMS1P48059 325 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 CCT3P49368 545 aaKnown RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 DAPP51397 102 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 HMGA2P52926 109 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 NUP107P57740 925 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 TNFRSF17Q02223 184 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 HSPB3Q12988 150 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 SLAMF1Q13291 335 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 IL10RAQ13651 578 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 PLCL1Q15111 1095 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ZIK1Q3SY52 487 aaPredicted RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 SPDYE7PQ495Y7 208 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 VWA2Q5GFL6 755 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 FCRL6Q6DN72 434 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 MYO7BQ6PIF6 2116 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ZNF773Q6PK81 442 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 FIGLAQ6QHK4 219 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 RNF44Q7L0R7 432 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 C6orf120Q7Z4R8 191 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ARHGAP22Q7Z5H3 698 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 TSEN54Q7Z6J9 526 aaKnown RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 GALNT10Q86SR1 603 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 FAM20CQ8IXL6 584 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ZNF655Q8N720 491 aaPredicted RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 AMER3Q8N944 861 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 CHDHQ8NE62 594 aaPredicted RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 FAM46DQ8NEK8 389 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 OR4C15Q8NGM1 316 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 OR10Q1Q8NGQ4 319 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 OR8K5Q8NH50 307 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 BBS10Q8TAM1 723 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 SUN3Q8TAQ9 357 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 UTP15Q8TED0 518 aaKnown RBP7.65□□□□□ -1.18
CD44-205ENST00000352818 RELTQ969Z4 430 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 TPD52L3Q96J77 140 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 C10orf90Q96M02 699 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 SERINC2Q96SA4 455 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 PIP5K1AQ99755 562 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ZFYVE21Q9BQ24 234 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 TUBA1CQ9BQE3 449 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 BTBD2Q9BX70 525 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 SYNPO2LQ9H987 977 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 UCK1Q9HA47 277 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 BCL2L10Q9HD36 194 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 FBXO8Q9NRD0 319 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 GIMAP4Q9NUV9 329 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 EXD2Q9NVH0 621 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 PTTG2Q9NZH5 202 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 NTMQ9P121 344 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 CPNE7Q9UBL6 633 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 NAALAD2Q9Y3Q0 740 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 PCDHGA10Q9Y5H3 936 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 SNX8Q9Y5X2 465 aa7.65□□□□□ -1.18
CD44-205ENST00000352818 ENPP4Q9Y6X5 453 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms