RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 TRIM69Q86WT6 500 aa12.48□□□□□ -0.41
CASC4-202ENST00000345795 OR13F1Q8NGS4 319 aa12.48□□□□□ -0.41
CASC4-202ENST00000345795 ZNF671Q8TAW3 534 aa12.48□□□□□ -0.41
CASC4-202ENST00000345795 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
CASC4-202ENST00000345795 H7C1C5 153 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 TFPIP10646 304 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 IDUAP35475 653 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 HSD17B2P37059 387 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 LCN6P62502 163 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 RPA4Q13156 261 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 ZSWIM7Q19AV6 140 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 OR2I1PQ8NGU4 316 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 TBC1D15Q8TC07 691 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 RAB11FIP5Q9BXF6 653 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 ALOXE3Q9BYJ1 711 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 SRA1Q9HD15 236 aaKnown RBP12.47□□□□□ -0.41
CASC4-202ENST00000345795 PPIEQ9UNP9 301 aaKnown RBP12.47□□□□□ -0.41
CASC4-202ENST00000345795 TSC22D4Q9Y3Q8 395 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 ICE1Q9Y2F5 2266 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 IGKV1-8A0A0C4DH67 115 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 CENPVL1A0A0U1RR11 272 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 H0YJX3 145 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 HCRTR1O43613 425 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 GABRG2P18507 467 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 GGT2P36268 569 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 XCR1P46094 333 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 SOX2P48431 317 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 SMIM11AP58511 58 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 ZNF846Q147U1 533 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 FAM69BQ5VUD6 431 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 SLC27A4Q6P1M0 643 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 MARCH9Q86YJ5 346 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 KBTBD8Q8NFY9 601 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 GPR32P1Q8NGA4 272 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 PHF21AQ96BD5 680 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 MSLNLQ96KJ4 702 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 BMFQ96LC9 184 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 DGAT2Q96PD7 388 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
CASC4-202ENST00000345795 FAM60AQ9NP50 221 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 A0A075B6Q4 140 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 DAPL1A0PJW8 107 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 HPRP00739 348 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 DPTQ07507 201 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 ST3GAL3Q11203 375 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 ZNF404Q494X3 552 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 OAFQ86UD1 273 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 CALHM3Q86XJ0 350 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 CCDC71Q8IV32 467 aaPredicted RBP12.47□□□□□ -0.41
CASC4-202ENST00000345795 OR4C6Q8NH72 309 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 RIT1Q92963 219 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
CASC4-202ENST00000345795 C7orf34Q96L11 122 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 FN3KQ9H479 309 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 C8orf4Q9NR00 106 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
CASC4-202ENST00000345795 NLRC5Q86WI3 1866 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 LILRB5O75023 590 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 TNFRSF21O75509 655 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 CLEC3AO75596 197 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 KRT8P05787 483 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 ADORA3P0DMS8 318 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 ELAVL4P26378 380 aaKnown RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 RBBP4Q09028 425 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 RUNX2Q13950 521 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 GNA13Q14344 377 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 MRPL2Q5T653 305 aaKnown RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 PHF19Q5T6S3 580 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 METTL2BQ6P1Q9 378 aaKnown RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 PRICKLE2Q7Z3G6 844 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 SYT9Q86SS6 491 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 RANBP3LQ86VV4 465 aaPredicted RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 LAS2Q8IYD9 372 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 BBS1Q8NFJ9 593 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 OR56A1Q8NGH5 318 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 PFN4Q8NHR9 129 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 ADOQ96SZ5 270 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 MRPS33Q9Y291 106 aaKnown RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 HEBP2Q9Y5Z4 205 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 SNTNA6NMZ2 147 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 CHST10O43529 356 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 EFEMP2O95967 443 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 PRPF38BQ5VTL8 546 aaKnown RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 XAF1Q6GPH4 301 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 ZER1Q7Z7L7 766 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 TP53I13Q8NBR0 393 aaPredicted RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 PAPD5Q8NDF8 572 aaKnown RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 FAM83FQ8NEG4 500 aaPredicted RBP12.46□□□□□ -0.41
CASC4-202ENST00000345795 SDR9C7Q8NEX9 313 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 OR13C2Q8NGS9 318 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 ORAI1Q96D31 301 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 ELP4Q96EB1 424 aa12.46□□□□□ -0.41
CASC4-202ENST00000345795 ZNF354BQ96LW1 612 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms