RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 C14orf28Q4W4Y0 310 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 GPAT3Q53EU6 434 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 KLHL35Q6PF15 583 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 Q6ZNX1 250 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 RBM44Q6ZP01 1051 aaKnown RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 USP53Q70EK8 1073 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 LGI4Q8N135 537 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 TTC29Q8NA56 475 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 CHDHQ8NE62 594 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 OR10G2Q8NGC3 310 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 OR9Q2Q8NGE9 314 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 THAP3Q8WTV1 239 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 SGCDQ92629 289 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 PROX1Q92786 737 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 EFHD2Q96C19 240 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 MPP4Q96JB8 637 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 FEVQ99581 238 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 DUSP15Q9H1R2 295 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 DDX18Q9NVP1 670 aaKnown RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 AASSQ9UDR5 926 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 CLCA2Q9UQC9 943 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 RNF215Q9Y6U7 377 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ZDBF2Q9HCK1 2354 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 hCG_2014768A0A024R1R8 64 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 A0A087WXM4 84 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 A0A0A6YYC8 382 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 IGHV5-51A0A0C4DH38 117 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 I3L1I5 382 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 CASC3O15234 703 aaKnown RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 BMP10O95393 424 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 EPPINO95925 133 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 AGXTP21549 392 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ALDH4A1P30038 563 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 LIMS1P48059 325 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ALDH3B2P48448 385 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 FNTBP49356 437 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 MICAQ29983 383 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 TRMT12Q53H54 448 aaKnown RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF628Q5EBL2 1059 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 YOD1Q5VVQ6 348 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 TCTN3Q6NUS6 607 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 Q6ZPB1 254 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 SPERTQ8NA61 448 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 SLC16A11Q8NCK7 471 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 BBS10Q8TAM1 723 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ZG16BQ96DA0 208 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 SLC35A4Q96G79 324 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF354BQ96LW1 612 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ACTRT3Q9BYD9 372 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ADNPQ9H2P0 1102 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ANKHQ9HCJ1 492 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 BCL2L10Q9HD36 194 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 NTMQ9P121 344 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 SPACA6W5XKT8 324 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 TRBV4-1A0A0J9YWV2 114 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 TRIM64CA6NLI5 447 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 RHPN2P1A8MT19 583 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 M0R3H8 397 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 CHST10O43529 356 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 UGT2B11O75310 529 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 GPR75O95800 540 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 RAB6AP20340 208 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 ANXA11P50995 505 aaKnown RBP8.61□□□□□ -1.03
ATG4A-202ENST00000345734 OR1D5P58170 312 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 RAC1P63000 192 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 IL5RAQ01344 420 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 CHRNEQ04844 493 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 WDR45BQ5MNZ6 344 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 C6orf141Q5SZD1 244 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 LAIR1Q6GTX8 287 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 MFSD12Q6NUT3 480 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 DEF8Q6ZN54 512 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 KRT73Q86Y46 540 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 SAMD14Q8IZD0 417 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-202ENST00000345734 OR2L13Q8N349 312 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 SLC25A45Q8N413 288 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 CNIH3Q8TBE1 160 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 ANKRD9Q96BM1 317 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-202ENST00000345734 TCTN2Q96GX1 697 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 MS4A4EQ96PG1 132 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 NIPSNAP1Q9BPW8 284 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 YTHDF1Q9BYJ9 559 aaKnown RBP8.61□□□□□ -1.03
ATG4A-202ENST00000345734 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 HCN3Q9P1Z3 774 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 LRIT1Q9P2V4 623 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 KCND3Q9UK17 655 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 GMPPBQ9Y5P6 360 aa8.61□□□□□ -1.03
ATG4A-202ENST00000345734 A0A0G2JPF8 293 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 HNRNPCL2B2RXH8 293 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 HNRNPCL3B7ZW38 293 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 H3BSA7 217 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FOXS1O43638 330 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 GADD45GO95257 159 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CT62P0C5K7 136 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 HNRNPCL4P0DMR1 293 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 POU2F1P14859 743 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ETS2P15036 469 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 NT5EP21589 574 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms