RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 LSRQ86X29 649 aaPredicted RBP12.12□□□□□ -0.47
TUBD1-202ENST00000340993 SLC15A4Q8N697 577 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 TRIML2Q8N7C3 387 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 C17orf47Q8NEP4 570 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 ARSGQ96EG1 525 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 OLAHQ9NV23 265 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 FAM53CQ9NYF3 392 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.12□□□□□ -0.47
TUBD1-202ENST00000340993 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 MYO18BQ8IUG5 2567 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
TUBD1-202ENST00000340993 CAPN14A8MX76 684 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 TFECO14948 347 aaPredicted RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 TSPAN2O60636 221 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 ZNF24P17028 368 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 CRATP43155 626 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 UQCRFS1P47985 274 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 POU6F2P78424 691 aaPredicted RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 ALDH6A1Q02252 535 aaKnown RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 CAPRIN1Q14444 709 aaKnown RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 SAXO2Q658L1 398 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 C16orf62Q7Z3J2 963 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 RETREG3Q86VR2 466 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 SNX32Q86XE0 403 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 FAM98AQ8NCA5 519 aaKnown RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 SPPL2AQ8TCT8 520 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 PAQR8Q8TEZ7 354 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 HGDQ93099 445 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 SGCZQ96LD1 299 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 FRMD6Q96NE9 622 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 SLC39A3Q9BRY0 314 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 PAIP1Q9H074 479 aaKnown RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 DEFB127Q9H1M4 99 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 TRIM45Q9H8W5 580 aaPredicted RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 PROK2Q9HC23 129 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 NTMQ9P121 344 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 TNFRSF10DQ9UBN6 386 aa12.11□□□□□ -0.47
TUBD1-202ENST00000340993 CNOT11Q9UKZ1 510 aaKnown RBP12.11□□□□□ -0.47
TUBD1-202ENST00000340993 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
TUBD1-202ENST00000340993 PRAMEF25A6NGN4 478 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 KLRC4-KLRK1H3BQV0 150 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 TO15178 435 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 SNX3O60493 162 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 NKX2-2O95096 273 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 UTS2O95399 124 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 SNRPB2P08579 225 aaKnown RBP12.1□□□□□ -0.47
TUBD1-202ENST00000340993 CELA3AP09093 270 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 ETFAP13804 333 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 EVI2BP34910 448 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 CASP3P42574 277 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GPR68Q15743 365 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GRAMD1BQ3KR37 738 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 MMEL1Q495T6 779 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 DCST2Q5T1A1 773 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 BHLHB9Q6PI77 547 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 MARCH3Q86UD3 253 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GPALPP1Q8IXQ4 340 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 FBXW8Q8N3Y1 598 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GOLM1Q8NBJ4 401 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 OR52N2Q8NGI0 321 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 MOAP1Q96BY2 351 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 NEURL3Q96EH8 262 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 OSBPL11Q9BXB4 747 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 TTTY12Q9BZ98 90 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 RTN4RQ9BZR6 473 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 SLC52A3Q9NQ40 469 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 SH3BGRL2Q9UJC5 107 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 ADAM21Q9UKJ8 722 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 CAPN7Q9Y6W3 813 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GCN1Q92616 2671 aaKnown RBP12.1□□□□□ -0.47
TUBD1-202ENST00000340993 OR6C70A6NIJ9 312 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 UNC5CO95185 931 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 ATP6V1C1P21283 382 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 CNR1P21554 472 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 MAGEA5P43359 124 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 MAN2A2P49641 1150 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 KHKP50053 298 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 NFYCQ13952 458 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 CYP27C1Q4G0S4 372 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 DHDDSQ86SQ9 333 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 MSRB3Q8IXL7 192 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GOT1L1Q8NHS2 421 aaPredicted RBP12.1□□□□□ -0.47
TUBD1-202ENST00000340993 ZFP90Q8TF47 636 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 TMCO6Q96DC7 493 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 GNRHR2Q96P88 292 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 CCT8L2Q96SF2 557 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 FAM173AQ9BQD7 235 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 QRSL1Q9H0R6 528 aaKnown RBP12.1□□□□□ -0.47
TUBD1-202ENST00000340993 PIGUQ9H490 435 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 TPT1P8Q9HAU6 139 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 SLC25A37Q9NYZ2 338 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 VAPAQ9P0L0 249 aa12.1□□□□□ -0.47
TUBD1-202ENST00000340993 MKLN1Q9UL63 735 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms