RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PLOD3O60568 738 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 SRPX2O60687 465 aaPredicted RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 FAM20BO75063 409 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 UGT2B17O75795 530 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 LCKP06239 509 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 CCDC159P0C7I6 412 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 CD1CP29017 333 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 TGFBR1P36897 503 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 RXRGP48443 463 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 EMDP50402 254 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 CRISP1P54107 249 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 LSM3P62310 102 aaKnown RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF267Q14586 743 aaPredicted RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ARHGAP11BQ3KRB8 267 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ENTPD8Q5MY95 495 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 DCST2Q5T1A1 773 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 CWF19L1Q69YN2 538 aaKnown RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 KLHL35Q6PF15 583 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF836Q6ZNA1 936 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 VWA5B2Q8N398 1253 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 GALNT15Q8N3T1 639 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 RCBTB1Q8NDN9 531 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 SETD9Q8NE22 299 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 RIT1Q92963 219 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 MOAP1Q96BY2 351 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 RBM18Q96H35 190 aaKnown RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 PINK1Q9BXM7 581 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 DSN1Q9H410 356 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 EGLN3Q9H6Z9 239 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 PDE7BQ9NP56 450 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 NECTIN3Q9NQS3 549 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 PTGFRNQ9P2B2 879 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 NDOR1Q9UHB4 597 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 TMCC3Q9ULS5 477 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 SLC9A8Q9Y2E8 581 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 COMMD3-BMI1R4GMX3 469 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 LOC400499M0QZD8 3231 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 CFAP47Q6ZTR5 3102 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 A0A1W2PRQ8 180 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 TLCD2A6NGC4 264 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 C19orf67A6NJJ6 358 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ASNA1O43681 348 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 GDF9O60383 454 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 SEC14L2O76054 403 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 STSP08842 583 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF182P17025 639 aaPredicted RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 MAP3K8P41279 467 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 TAS2R41P59536 307 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 STX4Q12846 297 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 VWA2Q5GFL6 755 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 C1orf189Q5VU69 101 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 DESI1Q6ICB0 168 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ACSM5Q6NUN0 579 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 LAPTM4BQ86VI4 370 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 KIF18BQ86Y91 864 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 COX18Q8N8Q8 333 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 TMEM255BQ8WV15 326 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 RASSF5Q8WWW0 418 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 GGHQ92820 318 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 FKBP10Q96AY3 582 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 CNPPD1Q9BV87 410 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 BTBD2Q9BX70 525 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 UCK2Q9BZX2 261 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 POLR2J3Q9H1A7 115 aaKnown RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 PIGUQ9H490 435 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 MTHFD2LQ9H903 347 aaPredicted RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 WARS2Q9UGM6 360 aaKnown RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 LIPT1Q9Y234 373 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF443Q9Y2A4 671 aaPredicted RBP6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 SPACA6W5XKT8 324 aa6.88□□□□□ -1.31
SRFBP1-201ENST00000339397 DUXAA6NLW8 204 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 ZAR1LA6NP61 321 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 PIP5K1CO60331 668 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 CYP7B1O75881 506 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 SLC35E2P0CK97 266 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 STT3AP46977 705 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF136P52737 540 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 FAM53BQ14153 422 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 WDR88Q6ZMY6 472 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 SHISA6Q6ZSJ9 500 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 P3H2Q8IVL5 708 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF614Q8N883 585 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 OR1L3Q8NH93 324 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 DIO2Q92813 273 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 TSLPQ969D9 159 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF566Q969W8 418 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 FAM46AQ96IP4 442 aaKnown RBP6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 FUNDC2Q9BWH2 189 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 ZNF350Q9GZX5 532 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 PLCL2Q9UPR0 1127 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 ERVK-19Q9WJR5 959 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 HEATR5AQ86XA9 2040 aa6.87□□□□□ -1.31
SRFBP1-201ENST00000339397 DMXL1Q9Y485 3027 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms