RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KLHL31Q9H511 634 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 HCN2Q9UL51 889 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TSPAN11A1L157 253 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 FBLP22087 321 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PRPH2P23942 346 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 YBX1P67809 324 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RPL13AP3Q6NVV1 102 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ETFBKMTQ8IXQ9 262 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 B3GNT7Q8NFL0 401 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC7A13Q8TCU3 470 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RPL3LQ92901 407 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 UBE2FQ969M7 185 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TMPRSS11EQ9UL52 423 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 POLR1CO15160 346 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 LCMT2O60294 686 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CD22P20273 847 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 NUDT1P36639 197 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ACTC1P68032 377 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ACTA1P68133 377 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 GBX1Q14549 363 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 FAM111BQ6SJ93 734 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC22A16Q86VW1 577 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RBM45Q8IUH3 476 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 OR6N2Q8NGY6 317 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TSEN15Q8WW01 171 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TRNT1Q96Q11 434 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC30A2Q9BRI3 323 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ZBTB20Q9HC78 741 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ERVK-11Q9UQG0 969 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PRAMEF2O60811 474 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PCSK6P29122 969 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PPP5CP53041 499 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 DUSP7Q16829 419 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 DCST2Q5T1A1 773 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 BICRALQ6AI39 1079 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 WDR53Q7Z5U6 358 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PIGKQ92643 395 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SGTBQ96EQ0 304 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 C16orf58Q96GQ5 468 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SRA1Q9HD15 236 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF221Q9UK13 617 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 F5P12259 2224 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 A8MVJ9 347 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SGK494L7N484 410 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC19A1P41440 591 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TNFRSF17Q02223 184 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 APOFQ13790 326 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 KLHL26Q53HC5 615 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 AGBL4Q5VU57 503 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 KDM4DQ6B0I6 523 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 GTF2IRD2BQ6EKJ0 949 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 GTF2IRD2Q86UP8 949 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 HHIPQ96QV1 700 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TIGARQ9NQ88 270 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PPM1BO75688 479 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 KLHL18O94889 574 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 KLK3P07288 261 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PGCP20142 388 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 S100GP29377 79 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 GPR143P51810 404 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 KIAA1024LP59773 190 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 HNRNPA0Q13151 305 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 DNASE1L3Q13609 305 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PLBD1Q6P4A8 553 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ASB18Q6ZVZ8 466 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 OR4K13Q8NH42 304 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RHOXF1Q8NHV9 184 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 BPIFA2Q96DR5 249 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PRRX2Q99811 253 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 UNC119BA6NIH7 251 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF670-ZNF695F2Z2N8 137 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 H0YGG7 62 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 DLGAP1O14490 977 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 FLRT2O43155 660 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CDK1P06493 297 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TCEA1P23193 301 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 OPRL1P41146 370 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ADPRHP54922 357 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ARF3P61204 181 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ERV3-1Q14264 604 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 OR5M3Q8NGP4 307 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SAMD8Q96LT4 415 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF559Q9BR84 538 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ING3Q9NXR8 418 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SUSD2Q9UGT4 822 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 DOCK1Q14185 1865 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CASP8AP2Q9UKL3 1982 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TRBV4-1A0A0J9YWV2 114 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 NDUFB2O95178 105 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SMIM18P0DKX4 95 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CD6P30203 668 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PIGAP37287 484 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 BCL6P41182 706 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SHFQ7M4L6 423 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ANKRD53Q8N9V6 530 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 BTBD2Q9BX70 525 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 LRIT1Q9P2V4 623 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TBC1D29Q9UFV1 150 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 MAU2Q9Y6X3 613 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SOX1O00570 391 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms