RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SCD5Q86SK9 330 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 PGBD5Q8N414 524 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 MS4A15Q8N5U1 240 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 ESX1Q8N693 406 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 HIST1H2ACQ93077 130 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 TMEM43Q9BTV4 400 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 HHATLQ9HCP6 504 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 ASAH2Q9NR71 780 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 TOGARAM1Q9Y4F4 1720 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 KDELR3O43731 214 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 GLAP06280 429 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 GABRB1P18505 474 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 GNALP38405 381 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 TLE2Q04725 743 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 TIGD3Q6B0B8 471 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 LINC00471Q8N535 108 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 OR52I1Q8NGK6 324 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 PELOQ9BRX2 385 aaKnown RBP12.52□□□□□ -0.41
COL2A1-201ENST00000337299 RPS10P5Q9NQ39 176 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 CFAP97Q9P2B7 532 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 FLVCR2Q9UPI3 526 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 TRBV23OR9-2A0A075B6M9 112 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 OIP5O43482 229 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SCGNO76038 276 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 NT5EP21589 574 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 GABRA5P31644 462 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 GDNFP39905 211 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF140P52738 457 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 DLX5P56178 289 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 GPR85P60893 370 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SEMA3BQ13214 749 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ADGRF1Q5T601 910 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF783Q6ZMS7 281 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF546Q86UE3 836 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 JAGN1Q8N5M9 183 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ANKRD53Q8N9V6 530 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 WDR20Q8TBZ3 569 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 LKAAEAR1Q8TD35 194 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 IL17FQ96PD4 163 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 BCL2L14Q9BZR8 327 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ELOVL2Q9NXB9 296 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 PTTG3PQ9NZH4 202 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 EXO1Q9UQ84 846 aaKnown RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 NME7Q9Y5B8 376 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 NHSL1Q5SYE7 1610 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SLC9B1P1A6NJY1 282 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 OR10H2O60403 315 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 MAS1P04201 325 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SRCP12931 536 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 TLX1P31314 330 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ETV6P41212 452 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 PON3Q15166 354 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 LIPJQ5W064 366 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 OR5W2Q8NH69 310 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZCCHC10Q8TBK6 192 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 F2RL3Q96RI0 385 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 CCDC3Q9BQI4 270 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 COMMD4Q9H0A8 199 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 LYARQ9NX58 379 aaKnown RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZMAT5Q9UDW3 170 aaKnown RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 PI15O43692 258 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SYN1P17600 705 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ACRV1P26436 265 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 S100A11P31949 105 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 HMGCLP35914 325 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 RFX2P48378 723 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 GATMP50440 423 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 CLDN20P56880 219 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 UBE2MP61081 183 aaKnown RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 RAB40BQ12829 278 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 TDGQ13569 410 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SBSNQ6UWP8 590 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 NUDT13Q86X67 352 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 CHAC2Q8WUX2 184 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 DNAJA3Q96EY1 480 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 CERS4Q9HA82 394 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 NEUROD4Q9HD90 331 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 IL26Q9NPH9 171 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 MYEF2Q9P2K5 600 aaKnown RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 DNAJC25-GNG10A0A024R161 153 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 LRRTM2O43300 516 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SCN2BO60939 215 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 CXCL14O95715 111 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SLC16A8O95907 504 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SCGB1D2O95969 90 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 PSMB1P20618 241 aaKnown RBP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 RAP2BP61225 183 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ILF3Q12906 894 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL2A1-201ENST00000337299 GBX1Q14549 363 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 PRAMEF14Q5SWL7 426 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 KIAA0319Q5VV43 1072 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF852Q6ZMS4 543 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 FAM129CQ86XR2 697 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms