RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 POM121L1PQ3SYA9 428 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 CD200R1LQ6Q8B3 271 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 TOMM5Q8N4H5 51 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 ZNF366Q8N895 744 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 OR6T1Q8NGN1 323 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 OR2T35Q8NGX2 323 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 OR8K5Q8NH50 307 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 LHFPL5Q8TAF8 219 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 C2orf15Q8WU43 125 aaKnown RBP12.91□□□□□ -0.34
SYNE3-201ENST00000334258 NEURL3Q96EH8 262 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 YIPF4Q9BSR8 244 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 A4GALTQ9NPC4 353 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 ISYNA1Q9NPH2 558 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 SLAMF7Q9NQ25 335 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 SLC13A4Q9UKG4 626 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 A0A1W2PRQ8 180 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 ATG13O75143 517 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 ZNF821O75541 412 aaPredicted RBP12.9□□□□□ -0.34
SYNE3-201ENST00000334258 TCRBP04435 133 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 URODP06132 367 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 EIF4EP06730 217 aaKnown RBP12.9□□□□□ -0.34
SYNE3-201ENST00000334258 EPHA5P54756 1037 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 TAP2Q03519 686 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 ZDHHC20Q5W0Z9 365 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 GPR139Q6DWJ6 353 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 LYPD4Q6UWN0 246 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 TMEM91Q6ZNR0 172 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 RFKQ969G6 155 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 SORCS2Q96PQ0 1159 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 C1QTNF6Q9BXI9 259 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 CHIAQ9BZP6 476 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 OSGEPL1Q9H4B0 414 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 CYB5R1Q9UHQ9 305 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 RASD1Q9Y272 281 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 NOSIPQ9Y314 301 aaKnown RBP12.9□□□□□ -0.34
SYNE3-201ENST00000334258 MYOFQ9NZM1 2061 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 FAM170BA6NMN3 283 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 M0R233 179 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 GNRH1P01148 92 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 PTNP21246 168 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 GSTM3P21266 225 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 DRD5P21918 477 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 LBX1P52954 281 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 PNLIPRP1P54315 467 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 TAS2R41P59536 307 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 CRYZQ08257 329 aaKnown RBP12.9□□□□□ -0.34
SYNE3-201ENST00000334258 ELAVL2Q12926 359 aaKnown RBP12.9□□□□□ -0.34
SYNE3-201ENST00000334258 GRM7Q14831 915 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 LGALSLQ3ZCW2 172 aaPredicted RBP12.9□□□□□ -0.34
SYNE3-201ENST00000334258 MTFR2Q6P444 385 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 TMEM220Q6QAJ8 160 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 HSD11B1LQ7Z5J1 315 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 LRRC28Q86X40 367 aaPredicted RBP12.9□□□□□ -0.34
SYNE3-201ENST00000334258 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 ACOT12Q8WYK0 555 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 NXPE2Q96DL1 559 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 TEX12Q9BXU0 123 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 BTBD1Q9H0C5 482 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 MAB21L2Q9Y586 359 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 KNL1Q8NG31 2342 aa12.9□□□□□ -0.34
SYNE3-201ENST00000334258 ALPK3Q96L96 1907 aa12.9□□□□□ -0.35
SYNE3-201ENST00000334258 FOXE1O00358 373 aaPredicted RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 HMGN4O00479 90 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 EFCAB14O75071 495 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 AHCYP23526 432 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CCR6P51684 374 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 GAS1P54826 345 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 RTL4Q6ZR62 310 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 C11orf96Q7Z7L8 435 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CFAP206Q8IYR0 622 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CHST14Q8NCH0 376 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 FBXO15Q8NCQ5 510 aaPredicted RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 OR51G2Q8NGK0 314 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 OR5P2Q8WZ92 322 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 SCMH1Q96GD3 660 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 HEXA-AS1Q9H8Q6 139 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CFDP00746 253 aaPredicted RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CKMP06732 381 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CLTBP09497 229 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 SHC1P29353 583 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 PTGER1P34995 402 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 ARHGAP15Q53QZ3 475 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CLLU1Q5K131 121 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CCNJQ5T5M9 372 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 FAM27D1Q5T7N8 215 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 ARSKQ6UWY0 536 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 COMTD1Q86VU5 262 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CRIPAKQ8N1N5 446 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 FTMTQ8N4E7 242 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 ARIH2OSQ8N7S6 290 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 SRFBP1Q8NEF9 429 aaKnown RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 SMPDL3AQ92484 453 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 FAM46AQ96IP4 442 aaKnown RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 COQ10AQ96MF6 247 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 ABHD1Q96SE0 405 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms