RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ZSCAN32Q9NX65 697 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 MLXQ9UH92 298 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 PFDN2Q9UHV9 154 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.32
PKP3-201ENST00000331563 FCF1Q9Y324 198 aaKnown RBP17.08■□□□□ 0.32
PKP3-201ENST00000331563 MEIKINA0A087WXM9 373 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 TMEM129A0AVI4 362 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 RNASET2O00584 256 aaKnown RBP17.07■□□□□ 0.32
PKP3-201ENST00000331563 TGM5O43548 720 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 ETHE1O95571 254 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 PITPNBP48739 271 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 DOC2AQ14183 400 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 ST3GAL2Q16842 350 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 RGS7BPQ6MZT1 257 aaPredicted RBP17.07■□□□□ 0.32
PKP3-201ENST00000331563 TOMM5Q8N4H5 51 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 TEFMQ96QE5 360 aaKnown RBP17.07■□□□□ 0.32
PKP3-201ENST00000331563 WRAP53Q9BUR4 548 aaKnown RBP17.07■□□□□ 0.32
PKP3-201ENST00000331563 OR6C2Q9NZP2 312 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
PKP3-201ENST00000331563 PTGFRNQ9P2B2 879 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 CTSFQ9UBX1 484 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 F11P03951 625 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 ACSL1P33121 698 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 BTCP35070 178 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 ARF5P84085 180 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 SEMG2Q02383 582 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 TSC22D1Q15714 1073 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 PABPC1L2AQ5JQF8 200 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 ACSM5Q6NUN0 579 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 PGBD2Q6P3X8 592 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 IL17RCQ8NAC3 791 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 SGK3Q96BR1 496 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 FCRL1Q96LA6 429 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 DPH7Q9BTV6 452 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 POLDIP3Q9BY77 421 aaKnown RBP17.07■□□□□ 0.32
PKP3-201ENST00000331563 TMEM38AQ9H6F2 299 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 SGK2Q9HBY8 427 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 WBP1LQ9NX94 342 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 NDOR1Q9UHB4 597 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 RNF215Q9Y6U7 377 aa17.07■□□□□ 0.32
PKP3-201ENST00000331563 A0A1W2PRU2 124 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 FAAHO00519 579 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CLDN7O95471 211 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CKMP06732 381 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CD3GP09693 182 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CD22P20273 847 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 MTNR1AP48039 350 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 EPHB3P54753 998 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 RAB33AQ14088 237 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 MACC1Q6ZN28 852 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 RBM45Q8IUH3 476 aaKnown RBP17.06■□□□□ 0.32
PKP3-201ENST00000331563 MOSPD2Q8NHP6 518 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 MED8Q96G25 268 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 OSGEPL1Q9H4B0 414 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 HCFC1R1Q9NWW0 138 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 EDARQ9UNE0 448 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 GAPDHSO14556 408 aaPredicted RBP17.06■□□□□ 0.32
PKP3-201ENST00000331563 CLDN11O75508 207 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CD160O95971 181 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 EIF4EP06730 217 aaKnown RBP17.06■□□□□ 0.32
PKP3-201ENST00000331563 H2AFB2P0C5Z0 115 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 C4BPBP20851 252 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 DRD5P21918 477 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CCR7P32248 378 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 ATP6V1E1P36543 226 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 MMP12P39900 470 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 GRIN2CQ14957 1233 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 ARMC12Q5T9G4 340 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 HSD17B8Q92506 261 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 ARHGAP9Q9BRR9 750 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 SYNDIG1Q9H7V2 258 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CD93Q9NPY3 652 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 ABHD14A-ACY1A0A1B0GW23 586 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 NPIPB8E9PQR5 432 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 BNIP3LO60238 219 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 TIMP1P01033 207 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 ALDOBP05062 364 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 OR12D1P0DN82 309 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 ACP2P11117 423 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 GIPRP48546 466 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 HNMTP50135 292 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 RHOAP61586 193 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 MC1RQ01726 317 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 RAB40BQ12829 278 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 TPGS2Q68CL5 300 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 WASH2PQ6VEQ5 465 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 LRRC28Q86X40 367 aaPredicted RBP17.06■□□□□ 0.32
PKP3-201ENST00000331563 ZNF527Q8NB42 609 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 OR5M3Q8NGP4 307 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 ZFP3Q96NJ6 502 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 DDOQ99489 341 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 IL21Q9HBE4 155 aa17.06■□□□□ 0.32
PKP3-201ENST00000331563 CHD5Q8TDI0 1954 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 E7EQ34 232 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 APOC3P02656 99 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 KIAA1024LP59773 190 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 SSTP61278 116 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 RPS26P62854 115 aaKnown RBP17.05■□□□□ 0.32
PKP3-201ENST00000331563 RAE1P78406 368 aaKnown RBP17.05■□□□□ 0.32
PKP3-201ENST00000331563 ZNF791Q3KP31 576 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms