RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 SRSF1Q07955 248 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLRN1-203ENST00000328863 LRRC74AQ0VAA2 488 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 CDC73Q6P1J9 531 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 CD163Q86VB7 1156 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 OR1J4Q8NGS1 313 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 CKAP2Q8WWK9 683 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 MED4Q9NPJ6 270 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 TCF7L2Q9NQB0 619 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 TINAGQ9UJW2 476 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 ZNF835Q9Y2P0 537 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 LIPGQ9Y5X9 500 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 LRRK2Q5S007 2527 aa13.57□□□□□ -0.24
CLRN1-203ENST00000328863 TRGV5A0A0B4J1U4 118 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 GNB5O14775 395 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 BCKDKO14874 412 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 UBDO15205 165 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 SUSD5O60279 629 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 ICOSLGO75144 302 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 SOX30O94993 753 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 HMGN2P05204 90 aaKnown RBP13.56□□□□□ -0.24
CLRN1-203ENST00000328863 ACP2P11117 423 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 ESRRAP11474 423 aaPredicted RBP13.56□□□□□ -0.24
CLRN1-203ENST00000328863 CYP4B1P13584 511 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 GCKP35557 465 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 PTGDSP41222 190 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 NME5P56597 212 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 GAB1Q13480 694 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 SLC10A1Q14973 349 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 TOMM20Q15388 145 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 C3AR1Q16581 482 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 DUSP5Q16690 384 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 TIGD3Q6B0B8 471 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 TRILQ7L0X0 811 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 ANKRD46Q86W74 232 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 CLECL1Q8IZS7 167 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 OR5AK3PQ8NH89 298 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 FAM57AQ8TBR7 257 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 PIK3R3Q92569 461 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 RELTQ969Z4 430 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 SARAFQ96BY9 339 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 SLC35G5Q96KT7 338 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 MARK4Q96L34 752 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 OR52B2Q96RD2 323 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 ACTRT3Q9BYD9 372 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 HHATLQ9HCP6 504 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 GALNT9Q9HCQ5 603 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 ZIM2Q9NZV7 527 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 GPR45Q9Y5Y3 372 aa13.56□□□□□ -0.24
CLRN1-203ENST00000328863 DIDO1Q9BTC0 2240 aaKnown RBP13.56□□□□□ -0.24
CLRN1-203ENST00000328863 NUP214P35658 2090 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-203ENST00000328863 FLNCQ14315 2725 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 PRSS51A0A1B0GVH4 220 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 FIGNL2A6NMB9 653 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 CCL21O00585 134 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 ZNF195O14628 629 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 SCO2O43819 266 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 PDE9AO76083 593 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 LDLRP01130 860 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 PGRP06401 933 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 CELA3AP09093 270 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 PTPN6P29350 595 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 LCN1P31025 176 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 MAP3K8P41279 467 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 WNT3P56703 355 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 UFM1P61960 85 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 POU6F2P78424 691 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-203ENST00000328863 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLRN1-203ENST00000328863 DESI1Q6ICB0 168 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 MIER2Q8N344 545 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 TRIML2Q8N7C3 387 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 SLC16A11Q8NCK7 471 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 ADAMTS15Q8TE58 950 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 NUDT8Q8WV74 236 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 RNF138Q8WVD3 245 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 SIKE1Q9BRV8 207 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 G6PC3Q9BUM1 346 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 TBL1XR1Q9BZK7 514 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 SLC6A15Q9H2J7 730 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 UBQLN3Q9H347 655 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 TP63Q9H3D4 680 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-203ENST00000328863 PIGUQ9H490 435 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 ACKR4Q9NPB9 350 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 SDR39U1Q9NRG7 319 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-203ENST00000328863 SDHAF3Q9NRP4 125 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 GIN1Q9NXP7 522 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 PPP4R1LQ9P1A2 415 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 BTNL2Q9UIR0 455 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
CLRN1-203ENST00000328863 USP9XQ93008 2570 aaPredicted RBP13.54□□□□□ -0.24
CLRN1-203ENST00000328863 A0A1B0GVC2 190 aa13.54□□□□□ -0.24
CLRN1-203ENST00000328863 GXYLT2A0PJZ3 443 aa13.54□□□□□ -0.24
CLRN1-203ENST00000328863 SLC22A3O75751 556 aa13.54□□□□□ -0.24
CLRN1-203ENST00000328863 TRAPPC6AO75865 159 aa13.54□□□□□ -0.24
CLRN1-203ENST00000328863 WISP2O76076 250 aa13.54□□□□□ -0.24
CLRN1-203ENST00000328863 CPSF4O95639 269 aaKnown RBP13.54□□□□□ -0.24
CLRN1-203ENST00000328863 IL6P05231 212 aa13.54□□□□□ -0.24
CLRN1-203ENST00000328863 HPNP05981 417 aa13.54□□□□□ -0.24
CLRN1-203ENST00000328863 RFPL3SP0C7P2 107 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms