RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-201ENST00000327908 RPS6KB2Q9UBS0 482 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 IL17BQ9UHF5 180 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 CLDN16Q9Y5I7 305 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 FAM186AA6NE01 2351 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ANKRD12Q6UB98 2062 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 GLOD5A6NK44 160 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 A8MUA0 341 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 GTPBP1O00178 669 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CDC123O75794 336 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 NR0B1P51843 470 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 DGKQP52824 942 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 GYS2P54840 703 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 DLX5P56178 289 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CXADRP78310 365 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CBFBQ13951 182 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 UBAP2LQ14157 1087 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF169Q14929 603 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FLYWCH1Q4VC44 716 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FAM199XQ6PEV8 388 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 C6orf89Q6UWU4 347 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 DLEU7Q6UYE1 221 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SSX8Q7RTT4 187 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 HDDC2Q7Z4H3 204 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 VASH2Q86V25 355 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 TMEM52Q8NDY8 209 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 KAT2AQ92830 837 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FAM162AQ96A26 154 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CIDECQ96AQ7 238 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ZHX1-C8orf76Q96EF9 292 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SCMH1Q96GD3 660 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 EPYCQ99645 322 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CAAP1Q9H8G2 361 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ADA2Q9NZK5 511 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PPP4R1LQ9P1A2 415 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ACTR3BQ9P1U1 418 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 TMEM181Q9P2C4 612 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PCDHB14Q9Y5E9 798 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SNPHO15079 494 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 NME2P1O60361 137 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 TNFRSF21O75509 655 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ITGA10O75578 1167 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PNMTP11086 282 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ACP2P11117 423 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 HOXB9P17482 250 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 RPS4Y1P22090 263 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 NME2P22392 152 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 MASP1P48740 699 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PRKAG1P54619 331 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CAPRIN1Q14444 709 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 BCL2A1Q16548 175 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FXNQ16595 210 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF791Q3KP31 576 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PRAMEF17Q5VTA0 474 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 C8orf82Q6P1X6 216 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SLC2A7Q6PXP3 512 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FAM111BQ6SJ93 734 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FAM180AQ6UWF9 173 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 LANCL3Q6ZV70 420 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 RNF130Q86XS8 419 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PM20D2Q8IYS1 436 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 DNAJA4Q8WW22 397 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 GIMAP5Q96F15 307 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 MPP4Q96JB8 637 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 RASL10BQ96S79 203 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ALG2Q9H553 416 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 KAT8Q9H7Z6 458 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SYNPO2LQ9H987 977 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 TMEM27Q9HBJ8 222 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SLC52A3Q9NQ40 469 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 TIGARQ9NQ88 270 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 TMEM5Q9Y2B1 443 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FAM32AQ9Y421 112 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 MED19A0JLT2 244 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 OR14I1A6ND48 311 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ANKUB1A6NFN9 424 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 EIF4E1BA6NMX2 242 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 AP3D1O14617 1153 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SUV39H1O43463 412 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CDC40O60508 579 aaKnown RBP eCLIP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 CBR3O75828 277 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 KCNK2O95069 426 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ACTL6AO96019 429 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PABPC4LP0CB38 370 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ITGAMP11215 1152 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 NR2C1P13056 603 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 SRD5A2P31213 254 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 PGM1P36871 562 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 DCTP40126 519 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 MAN2A2P49641 1150 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF41P51814 821 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 ID2Q02363 134 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 OC90Q02509 493 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 LIPEQ05469 1076 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 NPTX1Q15818 432 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 FAM98BQ52LJ0 330 aaKnown RBP4.77□□□□□ -1.65
LRIT3-201ENST00000327908 NANOGP8Q6NSW7 305 aa4.77□□□□□ -1.65
LRIT3-201ENST00000327908 MAMDC2Q7Z304 686 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms