RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 LRRTM2O43300 516 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 SEMA7AO75326 666 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 TRAPPC6AO75865 159 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 NKX2-2O95096 273 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 IL33O95760 270 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 PGRP06401 933 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 RFPL3SP0C7P2 107 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 EVI2BP34910 448 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 CHI3L1P36222 383 aaPredicted RBP17.12■□□□□ 0.33
CIRBP-201ENST00000320936 SNTA1Q13424 505 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 UBAP2LQ14157 1087 aaKnown RBP17.12■□□□□ 0.33
CIRBP-201ENST00000320936 SLC10A1Q14973 349 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.12■□□□□ 0.33
CIRBP-201ENST00000320936 ARHGAP11AQ6P4F7 1023 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 FJX1Q86VR8 437 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 CLEC4FQ8N1N0 589 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 OR1J4Q8NGS1 313 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 ADAMTS15Q8TE58 950 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 CDS1Q92903 461 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 TMEM41AQ96HV5 264 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 SLC35G5Q96KT7 338 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 ZIM2Q9NZV7 527 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 LIPGQ9Y5X9 500 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 POLEQ07864 2286 aa17.12■□□□□ 0.33
CIRBP-201ENST00000320936 ATP8B1O43520 1251 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 EDF1O60869 148 aaKnown RBP17.11■□□□□ 0.33
CIRBP-201ENST00000320936 TPOP07202 933 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 ELAVL4P26378 380 aaKnown RBP17.11■□□□□ 0.33
CIRBP-201ENST00000320936 IL12AP29459 219 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 PTGS2P35354 604 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 CLK3P49761 638 aaKnown RBP17.11■□□□□ 0.33
CIRBP-201ENST00000320936 RPS26P62854 115 aaKnown RBP17.11■□□□□ 0.33
CIRBP-201ENST00000320936 PHC1P78364 1004 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 POU6F2P78424 691 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-201ENST00000320936 STX5Q13190 355 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 HYAL4Q2M3T9 481 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 C4orf17Q53FE4 359 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 CDC73Q6P1J9 531 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 TMEM81Q6P7N7 255 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 FIGNL1Q6PIW4 674 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 SPPL2CQ8IUH8 684 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 GNRHR2Q96P88 292 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 PANX1Q96RD7 426 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 CCDC28BQ9BUN5 200 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 SDR39U1Q9NRG7 319 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-201ENST00000320936 TINAGQ9UJW2 476 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 C15orf41Q9Y2V0 281 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 WIF1Q9Y5W5 379 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 GTF3C1Q12789 2109 aa17.11■□□□□ 0.33
CIRBP-201ENST00000320936 A0A1B0GUH1 482 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 PRRG2O14669 202 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 SNPHO15079 494 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 UTS2O95399 124 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 VIMP08670 466 aaKnown RBP17.1■□□□□ 0.33
CIRBP-201ENST00000320936 STSP08842 583 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 TRPC1P48995 793 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 MAN2A2P49641 1150 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 PER3P56645 1201 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 GUCY1A3Q02108 690 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 C3AR1Q16581 482 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 TIGD2Q4W5G0 525 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 TIGD3Q6B0B8 471 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 C6orf120Q7Z4R8 191 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 OR9I1Q8NGQ6 314 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 CCDC115Q96NT0 180 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 STACQ99469 402 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 BTBD2Q9BX70 525 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 TBL1XR1Q9BZK7 514 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 SLC6A15Q9H2J7 730 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 SERHLQ9NQF3 203 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 DUSP22Q9NRW4 184 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 GPATCH2Q9NW75 528 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 FLRT3Q9NZU0 649 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 PPP4R1LQ9P1A2 415 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 BTNL2Q9UIR0 455 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 ERRFI1Q9UJM3 462 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-201ENST00000320936 ABCG2Q9UNQ0 655 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 DNAJC13O75165 2243 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 FREM3P0C091 2139 aa17.1■□□□□ 0.33
CIRBP-201ENST00000320936 UTP20O75691 2785 aaKnown RBP17.09■□□□□ 0.33
CIRBP-201ENST00000320936 TRGV5A0A0B4J1U4 118 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 A0A0G2JND7 137 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 CCL21O00585 134 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 KCNK2O95069 426 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 IGKV1D-16P01601 117 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 IL6P05231 212 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 ATP6V1C1P21283 382 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 UQCRC2P22695 453 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 PTGDSP41222 190 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 MAP3K8P41279 467 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 POLR2JP52435 117 aaKnown RBP17.09■□□□□ 0.33
CIRBP-201ENST00000320936 CASP9P55211 416 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 SRSF1Q07955 248 aaKnown RBP eCLIP17.09■□□□□ 0.331e-12■□□□□ 8.7
CIRBP-201ENST00000320936 GRAMD1BQ3KR37 738 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 CCNJQ5T5M9 372 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 OR5M10Q6IEU7 315 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 DNAJC14Q6Y2X3 702 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-201ENST00000320936 TRILQ7L0X0 811 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 CD163Q86VB7 1156 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms