RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FBXW4P57775 412 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 ZNF630Q2M218 657 aaPredicted RBP14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 FLYWCH1Q4VC44 716 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 REEP3Q6NUK4 255 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 ZCCHC12Q6PEW1 402 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 LINC00696Q6ZRV3 163 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 NET1Q7Z628 596 aaPredicted RBP14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 SPATA24Q86W54 205 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 KBTBD2Q8IY47 623 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 FAM86B1Q8N7N1 296 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 GATSQ8NAP1 163 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 FAM110BQ8TC76 370 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 OMA1Q96E52 524 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 SLC38A1Q9H2H9 487 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 MMADHCQ9H3L0 296 aaPredicted RBP14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 GMEB1Q9Y692 573 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 C17orf51A8MQB3 221 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 PCDH17O14917 1159 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 RRP8O43159 456 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ENTPD5O75356 428 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 BMP2P12643 396 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 TNFRSF1BP20333 461 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ATP6V1C1P21283 382 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 SOX3P41225 446 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 CRYBA2P53672 197 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 NRG3P56975 720 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 FOXD4Q12950 439 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 DECR1Q16698 335 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ARHGAP11BQ3KRB8 267 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 TYW3Q6IPR3 259 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 UNQ6494/PRO21346Q6UXR6 183 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 FRRS1Q6ZNA5 592 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 OR5L2Q8NGL0 311 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 SLC26A7Q8TE54 656 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 LRGUKQ96M69 825 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 FER1L6-AS2Q96M78 137 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 RASL10BQ96S79 203 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 DENND2DQ9H6A0 471 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ATP13A2Q9NQ11 1180 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 PCDHGB3Q9Y5G1 929 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 H0YHG0 523 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 M0QX08 132 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ACOT8O14734 319 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 MT-ND1P03886 318 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 SERPINA7P05543 415 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ICAM2P13598 275 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 DRD5P21918 477 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 TRHRP34981 398 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 KRT20P35900 424 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 EXOSC6Q5RKV6 272 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ZNF468Q5VIY5 522 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 HEPHL1Q6MZM0 1159 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ERICH5Q6P6B1 374 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 IL20RBQ6UXL0 311 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 RPS19BP1Q86WX3 136 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 VRK2Q86Y07 508 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 ZNF441Q8N8Z8 693 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 NUBPLQ8TB37 319 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 NACC2Q96BF6 587 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 VPS50Q96JG6 964 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 NSMCE2Q96MF7 247 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 SEPHS2Q99611 448 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 DPH1Q9BZG8 443 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 RLIMQ9NVW2 624 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 MAGEL2Q9UJ55 1249 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 NPFFR2Q9Y5X5 522 aa14.2□□□□□ -0.14
PDLIM5-202ENST00000318007 NBEAQ8NFP9 2946 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 DOCK10Q96BY6 2186 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 A0A1W2PQ72 361 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 C2orf72A6NCS6 295 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 CFAP73A6NFT4 308 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 ICOSLGO75144 302 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 UGT2B11O75310 529 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 STX11O75558 287 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 OR6B1O95007 311 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 STAMBPO95630 424 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 IFI6P09912 130 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 DMTNQ08495 405 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 BNIP2Q12982 314 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 MAPK14Q16539 360 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 BICRALQ6AI39 1079 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 ENPP6Q6UWR7 440 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 VTCN1Q7Z7D3 282 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 GALNT16Q8N428 558 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 TNIP2Q8NFZ5 429 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 OR4C3Q8NH37 302 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 TAMM41Q96BW9 452 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 TRNT1Q96Q11 434 aaKnown RBP14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 ZNF350Q9GZX5 532 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 GPR83Q9NYM4 423 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 POLHQ9Y253 713 aa14.19□□□□□ -0.14
PDLIM5-202ENST00000318007 AGR2O95994 175 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 KDELR2P33947 212 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 POLE2P56282 527 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 TLE3Q04726 772 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 RBBP4Q09028 425 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 AIMP2Q13155 320 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 PDZK1Q5T2W1 519 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 PTRH1Q86Y79 214 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 BEST3Q8N1M1 668 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms