RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TRABD2AQ86V40 505 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 ZZZ3Q8IYH5 903 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 OR2W6PQ8NHA6 318 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 FAM222BQ8WU58 562 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 WNT2BQ93097 391 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 GFM2Q969S9 779 aaKnown RBP16.12■□□□□ 0.17
TPM1-203ENST00000317516 PPCDCQ96CD2 204 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 ZBED6CLQ96FA7 236 aaPredicted RBP16.12■□□□□ 0.17
TPM1-203ENST00000317516 UCN2Q96RP3 112 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 SH3GL2Q99962 352 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 TUBA1CQ9BQE3 449 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 LMF2Q9BU23 707 aaKnown RBP16.12■□□□□ 0.17
TPM1-203ENST00000317516 REEP4Q9H6H4 257 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 PTGES2Q9H7Z7 377 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 HHATLQ9HCP6 504 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 SH3BP4Q9P0V3 963 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 EDARQ9UNE0 448 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 DNAJC15Q9Y5T4 150 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 TACC2O95359 2948 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 OTOGQ6ZRI0 2925 aa16.12■□□□□ 0.17
TPM1-203ENST00000317516 SCO2O43819 266 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 ZIC3O60481 467 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 TBX19O60806 448 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 RCBTB2O95199 551 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 IL33O95760 270 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 ALDH3A1P30838 453 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 GABRA3P34903 492 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 ASMTP46597 345 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 STARP49675 285 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 GAS1P54826 345 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 MANFP55145 182 aaKnown RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 HSPB3Q12988 150 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 GANABQ14697 944 aaKnown RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 RFTN2Q52LD8 501 aaPredicted RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 KANK2Q63ZY3 851 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 POMZP3Q6PJE2 187 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 ZNF551Q7Z340 670 aaPredicted RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 R3HCC1LQ7Z5L2 792 aaKnown RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 DDIASQ8IXT1 998 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 C9orf106Q8NAJ2 232 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 GOT1L1Q8NHS2 421 aaPredicted RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 FCRL1Q96LA6 429 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 FAM111AQ96PZ2 611 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 SFXN3Q9BWM7 321 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 DSN1Q9H410 356 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 FAM120CQ9NX05 1096 aaKnown RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 DNAJB12Q9NXW2 375 aaKnown RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 RPH3AQ9Y2J0 694 aaPredicted RBP16.11■□□□□ 0.17
TPM1-203ENST00000317516 TRAF6Q9Y4K3 522 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 PTGDR2Q9Y5Y4 395 aa16.11■□□□□ 0.17
TPM1-203ENST00000317516 TUBAL3A6NHL2 446 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 CLCA1A8K7I4 914 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 TMEM114B3SHH9 223 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 EEF1E1-BLOC1S5C9J1V9 151 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 LINC01387J3KSC0 135 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 EEF1E1O43324 174 aaKnown RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 AKAP10O43572 662 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 FADS1O60427 444 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 CTAG2O75638 210 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 PEPDP12955 493 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 SDC1P18827 310 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 POU3F2P20265 443 aaPredicted RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 MAPK1P28482 360 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 RFX3P48380 749 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 LHX2P50458 406 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 AGFG1P52594 562 aaKnown RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 EEFSECP57772 596 aaKnown RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 VSNL1P62760 191 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 RPL38P63173 70 aaKnown RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 SNTB1Q13884 538 aaKnown RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 FLYWCH1Q4VC44 716 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 ARL13AQ5H913 290 aaPredicted RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 LRIG3Q6UXM1 1119 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 ADGRE4PQ86SQ3 457 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 CDRT4Q8N9R6 151 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 OR2T11Q8NH01 316 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 MTERF3Q96E29 417 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 TSSK3Q96PN8 268 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 POLDIP3Q9BY77 421 aaKnown RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 TUBB1Q9H4B7 451 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 ACSS1Q9NUB1 689 aaPredicted RBP16.1■□□□□ 0.17
TPM1-203ENST00000317516 CRIM1Q9NZV1 1036 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 LGALS13Q9UHV8 139 aa16.1■□□□□ 0.17
TPM1-203ENST00000317516 HCFC1P51610 2035 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 LSM1O15116 133 aaKnown RBP16.09■□□□□ 0.17
TPM1-203ENST00000317516 ZNF708P17019 499 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 HK1P19367 917 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 SERPINB5P36952 375 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 RPL3P39023 403 aaKnown RBP16.09■□□□□ 0.17
TPM1-203ENST00000317516 PRKAG1P54619 331 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 SORDQ00796 357 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 C17orf67Q0P5P2 114 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 GALNTL6Q49A17 601 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 EMBQ6PCB8 327 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 GRAMD2AQ8IUY3 354 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 MEIOBQ8N635 442 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 FADS6Q8N9I5 356 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 OR2M3Q8NG83 312 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 GPR151Q8TDV0 419 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 DUSP19Q8WTR2 217 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms