RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SCYL2Q6P3W7 929 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 BTN2A1Q7KYR7 527 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 COX8CQ7Z4L0 72 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 TRPT1Q86TN4 253 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 BATF2Q8N1L9 274 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ALLCQ8N6M5 410 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SPATA18Q8TC71 538 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SLC2A14Q8TDB8 520 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 HPSE2Q8WWQ2 592 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SEPT8Q92599 483 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 C16orf58Q96GQ5 468 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CAPNS2Q96L46 248 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 DUX5Q96PT3 197 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 MED10Q9BTT4 135 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CALN1Q9BXU9 219 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CAPS2Q9BXY5 557 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 DUSP16Q9BY84 665 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ROPN1BQ9BZX4 212 aaPredicted RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 LIN28AQ9H9Z2 209 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ROPN1Q9HAT0 212 aaPredicted RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 HPF1Q9NWY4 346 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 DNPEPQ9ULA0 475 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CLCA3PQ9Y6N3 262 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 MGAMO43451 1857 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 ZNF487B1APH4 448 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 BOLA2-SMG1P6H3BVE0 249 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 APOC4-APOC2K7ER74 178 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 RASGRF2O14827 1237 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 XPO1O14980 1071 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 MCF2LO15068 1137 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 GRAP2O75791 330 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 PDGFBP01127 241 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 CRYAAP02489 173 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 APOC2P02655 101 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 RAF1P04049 648 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 IVLP07476 585 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 T-ENOLP0DO92 83 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 ODC1P11926 461 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 CCDC130P13994 396 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 AREGP15514 252 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 IVDP26440 423 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 CD52P31358 61 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 MAP2K2P36507 400 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 PRMT2P55345 433 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 HSD17B7P56937 341 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 OR1D5P58170 312 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 OTUD4Q01804 1114 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SLC3A1Q07837 685 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 MGAT3Q09327 533 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TRIP13Q15645 432 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 UAP1Q16222 522 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 KRT71Q3SY84 523 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 CCDC14Q49A88 953 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TTMPQ5BVD1 217 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 WSCD1Q658N2 575 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SPSB3Q6PJ21 355 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 B3GLCTQ6Y288 498 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 KDM7AQ6ZMT4 941 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 BZW1Q7L1Q6 419 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 PRSS35Q8N3Z0 413 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 OR1L3Q8NH93 324 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 ACTL9Q8TC94 416 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 FAM172AQ8WUF8 416 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 APOBEC4Q8WW27 367 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 P3H4Q92791 437 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 HAUS1Q96CS2 278 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 MRPL38Q96DV4 380 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 LYZL4Q96KX0 146 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SENP8Q96LD8 212 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SAMD8Q96LT4 415 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 RNF157Q96PX1 679 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TMEM109Q9BVC6 243 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 WWTR1Q9GZV5 400 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 ABCG4Q9H172 646 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 MTIF3Q9H2K0 278 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 GPN1Q9HCN4 374 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TBC1D13Q9NVG8 400 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SLC12A6Q9UHW9 1150 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 CDH9Q9ULB4 789 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 STAP1Q9ULZ2 295 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 DOCK3Q8IZD9 2030 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 RALGAPA2Q2PPJ7 1873 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SCN5AQ14524 2016 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SLC28A1O00337 649 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 DNALI1O14645 258 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 RGS16O15492 202 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 RIPK2O43353 540 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 B3GAT3O94766 335 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 NADKO95544 446 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TTC4O95801 387 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 MT-ATP6P00846 226 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 IFNB1P01574 187 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 MATKP42679 507 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 EIF3EP60228 445 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 DYNLT1P63172 113 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 DPYSL3Q14195 570 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 UPP1Q16831 310 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SLC25A52Q3SY17 297 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms