RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 MBNL1Q9NR56 388 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ACTR10Q9NZ32 417 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 MGAT4BQ9UQ53 548 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 SAMHD1Q9Y3Z3 626 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 PCDHGB7Q9Y5F8 929 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 CIB4A0PJX0 185 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 EFCAB10A6NFE3 127 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 GPR89AB7ZAQ6 455 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 CASC3O15234 703 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF780AO75290 641 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 GPR89BP0CG08 455 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 TCEA1P23193 301 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 NFKBIAP25963 317 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 APEX1P27695 318 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 SNRPD1P62314 119 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 MRPS21P82921 87 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 CYP27C1Q4G0S4 372 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 LRRC73Q5JTD7 316 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF529Q6P280 563 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 USP45Q70EL2 814 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 GHDCQ8N2G8 530 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF540Q8NDQ6 660 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 SMG7Q92540 1137 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 KLHL15Q96M94 604 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 APOL4Q9BPW4 351 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 C1QTNF2Q9BXJ5 285 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 OR2B2Q9GZK3 357 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 NACA2Q9H009 215 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ISG20L2Q9H9L3 353 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 FBRSQ9HAH7 460 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ERVK13-1Q9NX77 482 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 SPATA7Q9P0W8 599 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 THAP10Q9P2Z0 257 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ITGB1BP2Q9UKP3 347 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 KALRNO60229 2985 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 AKAP9Q99996 3911 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 TNFRSF11BO00300 401 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 FMO6PO60774 539 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 TRIM3O75382 744 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CLEC3AO75596 197 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ATP1B1P05026 303 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 MAPK1P28482 360 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CTHP32929 405 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 GZMKP49863 264 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PPP2CBP62714 309 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PPP2CAP67775 309 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 TSPAN31Q12999 210 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 GNA13Q14344 377 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 DAZAP2Q15038 168 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ARHGAP11BQ3KRB8 267 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 FBXO42Q6P3S6 717 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CLIP4Q8N3C7 705 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 LNX2Q8N448 690 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 AQP11Q8NBQ7 271 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 OR2L8Q8NGY9 312 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 SLC35A4Q96G79 324 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 C1orf198Q9H425 327 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 NANSQ9NR45 359 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 FLRT3Q9NZU0 649 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 A0A1W2PQ09 198 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 MSTNO14793 375 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CHP2O43745 196 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 TFP02787 698 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 OPN1SWP03999 348 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 YES1P07947 543 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ANXA4P09525 319 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 MAKP20794 623 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PSMB5P28074 263 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 GPC1P35052 558 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 RGS4P49798 205 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 EPHB3P54753 998 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 TAS2R50P59544 299 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 NFE2L1Q14494 772 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 VEPH1Q14D04 833 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ARSIQ5FYB1 569 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CPTPQ5TA50 214 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 DNAJC14Q6Y2X3 702 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 RNF44Q7L0R7 432 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 OLIG3Q7RTU3 272 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 SPEM1Q8N4L4 309 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CAMKK1Q8N5S9 505 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 TMEM145Q8NBT3 493 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 THAP11Q96EK4 314 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 THUMPD3Q9BV44 507 aaKnown RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 TRMT61BQ9BVS5 477 aaKnown RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 FAM83DQ9H4H8 585 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 C20orf141Q9NUB4 165 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 KLF2Q9Y5W3 355 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 A0A1W2PRU2 124 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 LEUTXA8MZ59 168 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CCL16O15467 120 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PLRG1O43660 514 aaKnown RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 MPZL2O60487 215 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 MMP20O60882 483 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 UBXN7O94888 489 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 TRIM16O95361 564 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 OR56A5P0C7T3 313 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ADRB3P13945 408 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 DRD2P14416 443 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 DRD1P21728 446 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms