RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 CDS1Q92903 461 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 NACC2Q96BF6 587 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 MSLNLQ96KJ4 702 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 BTBD1Q9H0C5 482 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 PHPT1Q9NRX4 125 aaPredicted RBP23.72■■□□□ 1.39
HOXB3-201ENST00000311626 TMEM74BQ9NUR3 256 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 NUFIP1Q9UHK0 495 aaKnown RBP23.72■■□□□ 1.39
HOXB3-201ENST00000311626 NDRG2Q9UN36 371 aaKnown RBP23.72■■□□□ 1.39
HOXB3-201ENST00000311626 A0A0C4DFX4 3053 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 SLC35F4A4IF30 521 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 PROM1O43490 865 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 HPGDSO60760 199 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 RGS8P57771 180 aaPredicted RBP23.71■■□□□ 1.39
HOXB3-201ENST00000311626 TMEM64Q6YI46 380 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 GALNT12Q8IXK2 581 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 IL17RCQ8NAC3 791 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 ZNF764Q96H86 408 aaPredicted RBP23.71■■□□□ 1.39
HOXB3-201ENST00000311626 SLC38A2Q96QD8 506 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 PITHD1Q9GZP4 211 aaPredicted RBP23.71■■□□□ 1.39
HOXB3-201ENST00000311626 MED20Q9H944 212 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 FGF20Q9NP95 211 aaPredicted RBP23.71■■□□□ 1.39
HOXB3-201ENST00000311626 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.71■■□□□ 1.39
HOXB3-201ENST00000311626 BTN3A3O00478 584 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 SLC31A1O15431 190 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 PRR5P85299 388 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 UBE3AQ05086 875 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 P2RY14Q15391 338 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 MINDY4Q4G0A6 757 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 QSOX2Q6ZRP7 698 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 TMEFF1Q8IYR6 380 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 SETD6Q8TBK2 473 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 TP53INP1Q96A56 240 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 MCHR1Q99705 422 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 PLSCR3Q9NRY6 295 aa23.71■■□□□ 1.39
HOXB3-201ENST00000311626 TRANK1O15050 2925 aa23.7■■□□□ 1.39
HOXB3-201ENST00000311626 CASC3O15234 703 aaKnown RBP23.7■■□□□ 1.38
HOXB3-201ENST00000311626 MPIP34949 423 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 SLC1A3P43003 542 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 STXBP1P61764 594 aaKnown RBP23.7■■□□□ 1.38
HOXB3-201ENST00000311626 RPE65Q16518 533 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 TJAP1Q5JTD0 557 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 DDI2Q5TDH0 399 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 BHLHB9Q6PI77 547 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 HSDL2Q6YN16 418 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 RD3Q7Z3Z2 195 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 OR7G2Q8NG99 324 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 OR14C36Q8NHC7 312 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 ZCCHC10Q8TBK6 192 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 UBASH3BQ8TF42 649 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 TBX5Q99593 518 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 ARHGDIGQ99819 225 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 LIPT1Q9Y234 373 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 CDC42EP2O14613 210 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 PLA2G10O15496 165 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 ATP6V1E1P36543 226 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 SGCGQ13326 291 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 TPBGQ13641 420 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 RTL10Q7L3V2 364 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 CLDN22Q8N7P3 220 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 TTLQ8NG68 377 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 PIGXQ8TBF5 258 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 CHAC2Q8WUX2 184 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 ZNF681Q96N22 645 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 FYTTD1Q96QD9 318 aaKnown RBP23.7■■□□□ 1.38
HOXB3-201ENST00000311626 ARHGAP9Q9BRR9 750 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 CA5BQ9Y2D0 317 aa23.7■■□□□ 1.38
HOXB3-201ENST00000311626 HRO43593 1189 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 PRICKLE3O43900 615 aaPredicted RBP23.69■■□□□ 1.38
HOXB3-201ENST00000311626 KIAA1211LQ6NV74 962 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 GDF7Q7Z4P5 450 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 MARCH9Q86YJ5 346 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 SFXN5Q8TD22 340 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 SAMD8Q96LT4 415 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 PRRG3Q9BZD7 231 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 ZNF780BQ9Y6R6 833 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 A0A0B4J293 547 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 A0A1W2PQU0 124 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 TMEM129A0AVI4 362 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 POLR1CO15160 346 aaPredicted RBP23.69■■□□□ 1.38
HOXB3-201ENST00000311626 ZNF888P0CJ79 500 aaPredicted RBP23.69■■□□□ 1.38
HOXB3-201ENST00000311626 AK4P27144 223 aaPredicted RBP23.69■■□□□ 1.38
HOXB3-201ENST00000311626 SIM1P81133 766 aaPredicted RBP23.69■■□□□ 1.38
HOXB3-201ENST00000311626 ST3GAL3Q11203 375 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 RUNX3Q13761 415 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 ZFP69Q49AA0 526 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 XKRXQ6PP77 449 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 LINC00471Q8N535 108 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 ADAMTS15Q8TE58 950 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 SPRYD4Q8WW59 207 aaPredicted RBP23.69■■□□□ 1.38
HOXB3-201ENST00000311626 RNF31Q96EP0 1072 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 GIMAP5Q96F15 307 aa23.69■■□□□ 1.38
HOXB3-201ENST00000311626 RANGRFQ9HD47 186 aaPredicted RBP23.69■■□□□ 1.38
HOXB3-201ENST00000311626 NPIPA5A0A0B4J1W7 369 aa23.68■■□□□ 1.38
HOXB3-201ENST00000311626 KDM4EB2RXH2 506 aaPredicted RBP23.68■■□□□ 1.38
HOXB3-201ENST00000311626 NPIPA7E9PJI5 369 aa23.68■■□□□ 1.38
HOXB3-201ENST00000311626 STK25O00506 426 aa23.68■■□□□ 1.38
HOXB3-201ENST00000311626 NPIPA8P0DM63 369 aa23.68■■□□□ 1.38
HOXB3-201ENST00000311626 KIR2DL3P43628 341 aa23.68■■□□□ 1.38
HOXB3-201ENST00000311626 ANXA11P50995 505 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms