RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ALOX5P09917 674 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 CLEC2LP0C7M8 214 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 NDUFV2P19404 249 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 MAGEA10P43363 369 aaPredicted RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 ILF3Q12906 894 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SRSF5Q13243 272 aaKnown RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 EXOSC7Q15024 291 aaKnown RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 NCF4Q15080 339 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 TAB1Q15750 504 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 MFSD12Q6NUT3 480 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SPATC1Q76KD6 591 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 ANKK1Q8NFD2 765 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 OR4F15Q8NGB8 312 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 GPR151Q8TDV0 419 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 TRNT1Q96Q11 434 aaKnown RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 TBX5Q99593 518 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 POLDIP3Q9BY77 421 aaKnown RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 LYARQ9NX58 379 aaKnown RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 ACTR10Q9NZ32 417 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SLC7A7Q9UM01 511 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 CDC123O75794 336 aaPredicted RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SNX4O95219 450 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SPNP16150 400 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 MTNR1AP48039 350 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 CDH11P55287 796 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 CAV3P56539 151 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 PPP1CAP62136 330 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 RHAGQ02094 409 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 TNFRSF17Q02223 184 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 NDUFA9Q16795 377 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 CRTC2Q53ET0 693 aaPredicted RBP10.8□□□□□ -0.68
PTPN2-201ENST00000309660 MEDAGQ5VYS4 303 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 CDC73Q6P1J9 531 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 LINC00299Q6ZSB3 139 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 Q6ZSR6 202 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 LAX1Q8IWV1 398 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 PHC2Q8IXK0 858 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 PEX5LQ8IYB4 626 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 NANOGP1Q8N7R0 232 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SYT14Q8NB59 555 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 SLC22A18Q96BI1 424 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 CCDC3Q9BQI4 270 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 TBC1D17Q9HA65 648 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 FBXO34Q9NWN3 711 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 HRASLS2Q9NWW9 162 aa10.8□□□□□ -0.68
PTPN2-201ENST00000309660 TDRD6O60522 2096 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SSX4O60224 188 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 PIPP12273 146 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 PRG2P13727 222 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 GSTM3P21266 225 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 HNRNPA2B1P22626 353 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 NDUFS1P28331 727 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TNFSF8P32971 234 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 CD79BP40259 229 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TMED10P49755 219 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SRP54P61011 504 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TMEM92Q6UXU6 159 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF438Q7Z4V0 828 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 UBE2J2Q8N2K1 259 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 FAM3CQ92520 227 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 MOAP1Q96BY2 351 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SLC41A3Q96GZ6 507 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF764Q96H86 408 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 MS4A4EQ96PG1 132 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 NELL2Q99435 816 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SLC30A2Q9BRI3 323 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SMURF1Q9HCE7 757 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TIGARQ9NQ88 270 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 CCDC59Q9P031 241 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 LIPT1Q9Y234 373 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 CHST2Q9Y4C5 530 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SAGE2PA6NJ88 616 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 DUXAA6NLW8 204 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 UBXN7O94888 489 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 CELA2BP08218 269 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TEAD1P28347 426 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TPMTP51580 245 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 VSX2P58304 361 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF45Q02386 682 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 HNRNPA0Q13151 305 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 LARS2Q15031 903 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ALG11Q2TAA5 492 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF791Q3KP31 576 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ZMAT1Q5H9K5 638 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 EGFL6Q8IUX8 553 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 COX18Q8N8Q8 333 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 PROKR2Q8NFJ6 384 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 BBS1Q8NFJ9 593 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 GNPDA2Q8TDQ7 276 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 OR2A14Q96R47 310 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 FUZQ9BT04 418 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ANKHQ9HCJ1 492 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 CALML5Q9NZT1 146 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 H2AFY2Q9P0M6 372 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SEC14L4Q9UDX3 406 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 A8MU76 341 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 H0YGG7 62 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TAF4O00268 1085 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms