RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 HOXB9P17482 250 aaPredicted RBP20.27■□□□□ 0.84
SNUPN-201ENST00000308588 RFX3P48380 749 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 RPP38P78345 283 aaKnown RBP20.27■□□□□ 0.84
SNUPN-201ENST00000308588 FOXO1Q12778 655 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 RNFT1Q5M7Z0 435 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 FIGNL1Q6PIW4 674 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 DNAJB8Q8NHS0 232 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 ZFP90Q8TF47 636 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 TMCO6Q96DC7 493 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 ANGPTL4Q9BY76 406 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 OR51I1Q9H343 314 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 FBXO34Q9NWN3 711 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 PCDHB14Q9Y5E9 798 aa20.27■□□□□ 0.84
SNUPN-201ENST00000308588 NINQ8N4C6 2090 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 A0A096LPI6 279 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 DUXAA6NLW8 204 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 SNRPB2P08579 225 aaKnown RBP20.27■□□□□ 0.83
SNUPN-201ENST00000308588 RFC3P40938 356 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 PTGDSP41222 190 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 PSMD4P55036 377 aaKnown RBP20.27■□□□□ 0.83
SNUPN-201ENST00000308588 POU6F2P78424 691 aaPredicted RBP20.27■□□□□ 0.83
SNUPN-201ENST00000308588 TBCELQ5QJ74 424 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 LRIF1Q5T3J3 769 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 CCNJQ5T5M9 372 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 PIGWQ7Z7B1 504 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 ZAR1Q86SH2 424 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 GALNT10Q86SR1 603 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 ZNF605Q86T29 641 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 RNF130Q86XS8 419 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 POGLUT1Q8NBL1 392 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 RNF138Q8WVD3 245 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 DOHHQ9BU89 302 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 TUBA8Q9NY65 449 aaPredicted RBP20.27■□□□□ 0.83
SNUPN-201ENST00000308588 FLRT3Q9NZU0 649 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 ADAM21Q9UKJ8 722 aa20.27■□□□□ 0.83
SNUPN-201ENST00000308588 ZNF462Q96JM2 2506 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 ICOSLGO75144 302 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 WISP2O76076 250 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 CRYABP02511 175 aaKnown RBP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 ADSLP30566 484 aaPredicted RBP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 KCNJ2P63252 427 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 TNFAIP8L2Q6P589 184 aaPredicted RBP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 PNPT1Q8TCS8 783 aaKnown RBP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 AURKBQ96GD4 344 aaPredicted RBP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 METTL7AQ9H8H3 244 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 TPT1P8Q9HAU6 139 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 AGPAT4Q9NRZ5 378 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 LEF1Q9UJU2 399 aaPredicted RBP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 NDUFAF1Q9Y375 327 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 PCDHGB3Q9Y5G1 929 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.26■□□□□ 0.83
SNUPN-201ENST00000308588 SHANK1Q9Y566 2161 aa20.26■□□□□ 0.83
SNUPN-201ENST00000308588 TRIM3O75382 744 aaPredicted RBP20.25■□□□□ 0.83
SNUPN-201ENST00000308588 OR12D1P0DN82 309 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 MST1P26927 711 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 MVDP53602 400 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 SNTA1Q13424 505 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 COX20Q5RI15 118 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 ANGPTL8Q6UXH0 198 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 RETREG3Q86VR2 466 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 MSRB3Q8IXL7 192 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 NR4A3Q92570 626 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 RAB8BQ92930 207 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 MIB2Q96AX9 1013 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 GALNT9Q9HCQ5 603 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 OLAHQ9NV23 265 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 SLC25A37Q9NYZ2 338 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 ARMCX1Q9P291 453 aa20.25■□□□□ 0.83
SNUPN-201ENST00000308588 PRRC2CQ9Y520 2896 aaKnown RBP20.25■□□□□ 0.83
SNUPN-201ENST00000308588 PRAMEF25A6NGN4 478 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 ASNA1O43681 348 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 CCDC22O60826 627 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 SHOX2O60902 331 aaPredicted RBP20.24■□□□□ 0.83
SNUPN-201ENST00000308588 GLSO94925 669 aaPredicted RBP20.24■□□□□ 0.83
SNUPN-201ENST00000308588 SNX4O95219 450 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 KRT75O95678 551 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 DCST2Q5T1A1 773 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 FNDC7Q5VTL7 733 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 SLC30A6Q6NXT4 461 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 DLEU7Q6UYE1 221 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 MTDHQ86UE4 582 aaKnown RBP20.24■□□□□ 0.83
SNUPN-201ENST00000308588 SIAH3Q8IW03 269 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 CHDHQ8NE62 594 aaPredicted RBP20.24■□□□□ 0.83
SNUPN-201ENST00000308588 XAGE5Q8WWM1 108 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 SLX1AQ9BQ83 275 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 TTTY12Q9BZ98 90 aa20.24■□□□□ 0.83
SNUPN-201ENST00000308588 TRBV5-3A0A0A0MS03 114 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 C2orf72A6NCS6 295 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 LRRC3CA6NJW4 275 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 HMGN4O00479 90 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 FBP2O00757 339 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 ADAM10O14672 748 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 ANGPT2O15123 496 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 SLC22A2O15244 555 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 HS6ST1O60243 411 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 FADS1O60427 444 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 UNC5CO95185 931 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 UTS2O95399 124 aa20.23■□□□□ 0.83
SNUPN-201ENST00000308588 ZNF24P17028 368 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms