RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 PRIM2P49643 509 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 ITGA1P56199 1179 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 RAB38P57729 211 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 FOLH1Q04609 750 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 C16orf72Q14CZ0 275 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 ADRM1Q16186 407 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 VMACQ2NL98 169 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 PHF19Q5T6S3 580 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 NIPAL1Q6NVV3 410 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 RPUSD3Q6P087 351 aaKnown RBP10.04□□□□□ -0.8
CASP3-201ENST00000308394 ZCCHC12Q6PEW1 402 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 TMEM107Q6UX40 140 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 C6orf120Q7Z4R8 191 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 PHC2Q8IXK0 858 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 LRRC25Q8N386 305 aaPredicted RBP10.04□□□□□ -0.8
CASP3-201ENST00000308394 TMEM52Q8NDY8 209 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 ADCY4Q8NFM4 1077 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 OR9A2Q8NGT5 310 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 FNDC8Q8TC99 324 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 RNF31Q96EP0 1072 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 CCDC74BQ96LY2 380 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 ZNF681Q96N22 645 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 NDC1Q9BTX1 674 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 KCNN2Q9H2S1 579 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 ZCCHC3Q9NUD5 404 aaKnown RBP10.04□□□□□ -0.8
CASP3-201ENST00000308394 STOML1Q9UBI4 398 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 DHCR7Q9UBM7 475 aaKnown RBP10.04□□□□□ -0.8
CASP3-201ENST00000308394 EXTL2Q9UBQ6 330 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 AP4S1Q9Y587 144 aa10.04□□□□□ -0.8
CASP3-201ENST00000308394 TRAV20A0A0B4J274 112 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 DHRS12A0PJE2 317 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 KLF4O43474 513 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 CREG1O75629 220 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 CRTAPO75718 401 aaPredicted RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 SCAF4O95104 1147 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 CLUP10909 449 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 CKMT2P17540 419 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SLC9A3P48764 834 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 RPS26P62854 115 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 CNPY1Q3B7I2 92 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 CPZQ66K79 652 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 GPR155Q7Z3F1 870 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 ZZZ3Q8IYH5 903 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 NETO1Q8TDF5 533 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SEPHS2Q99611 448 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 CTRCQ99895 268 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SEC22CQ9BRL7 303 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 MARCH7Q9H992 704 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 DDX28Q9NUL7 540 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 CENPBD1B2RD01 187 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 GPR171O14626 319 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 FLRT2O43155 660 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SLC25A17O43808 307 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 FGF17O60258 216 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 B4GALT2O60909 372 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 RNH1P13489 461 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 BMI1P35226 326 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 PTDSS1P48651 473 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 EIF2B2P49770 351 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 MVDP53602 400 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SPEM2Q0P670 501 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 FADDQ13158 208 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SLC13A2Q13183 592 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 LTB4RQ15722 352 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 TNFAIP8L2Q6P589 184 aaPredicted RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 CEACAM20Q6UY09 585 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 PTOV1Q86YD1 416 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 KAT2AQ92830 837 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 PPWD1Q96BP3 646 aaKnown RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 ZNF501Q96CX3 271 aaPredicted RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 NEURL3Q96EH8 262 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 OR6C1Q96RD1 312 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 DPYSL5Q9BPU6 564 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 TRIM2Q9C040 744 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 TIMMDC1Q9NPL8 285 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 FTSJ1Q9UET6 329 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 SSUH2Q9Y2M2 353 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 TMEM184BQ9Y519 407 aaPredicted RBP10.03□□□□□ -0.8
CASP3-201ENST00000308394 PCDHGB2Q9Y5G2 931 aa10.03□□□□□ -0.8
CASP3-201ENST00000308394 H3BMH7 237 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 ZNF749O43361 778 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 GPR75O95800 540 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 ZNF806P0C7X5 589 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 SPTBP11277 2137 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 CPMP14384 443 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 SLC7A1P30825 629 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 MC3RP41968 323 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 OR1D4P47884 311 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 CEBPEQ15744 281 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 CCDC157Q569K6 752 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 TBCELQ5QJ74 424 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 SAXO2Q658L1 398 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 RNF111Q6ZNA4 994 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 ZC3H7AQ8IWR0 971 aaKnown RBP10.02□□□□□ -0.8
CASP3-201ENST00000308394 OR51Q1Q8NH59 317 aa10.02□□□□□ -0.8
CASP3-201ENST00000308394 PSMA8Q8TAA3 256 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms