RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 NR1D2Q14995 579 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 FLYWCH1Q4VC44 716 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 DHRS4L2Q6PKH6 230 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 DEPDC4Q8N2C3 294 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 DTWD2Q8NBA8 298 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 OR2I1PQ8NGU4 316 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 MCHR1Q99705 422 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 UCK2Q9BZX2 261 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 Q9N2J8 555 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 A4GNTQ9UNA3 340 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 HEMK1Q9Y5R4 338 aaPredicted RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 DSPPQ9NZW4 1301 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 NPIPA5A0A0B4J1W7 369 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 NPIPA7E9PJI5 369 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 SLC1A7O00341 560 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 FAM20BO75063 409 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 SYPP08247 313 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 NPIPA8P0DM63 369 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 PNLIPP16233 465 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 CRHBPP24387 322 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 CDC42P60953 191 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 ST3GAL3Q11203 375 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 KCTD8Q6ZWB6 473 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 RANBP3LQ86VV4 465 aaPredicted RBP13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 LINC00471Q8N535 108 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 DGCR14Q96DF8 476 aaKnown RBP13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 RNF31Q96EP0 1072 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 SLC6A14Q9UN76 642 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 GXYLT2A0PJZ3 443 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 ARRDC5A6NEK1 342 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 IFI6P09912 130 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 IFNGR2P38484 337 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 LIMS1P48059 325 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 CCL7P80098 99 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 HOXC5Q00444 222 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 ACY1Q03154 408 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF773Q6PK81 442 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 Q6ZPB1 254 aaPredicted RBP13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 COMTD1Q86VU5 262 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 CLIP4Q8N3C7 705 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 SLC7A13Q8TCU3 470 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 HRASLS5Q96KN8 279 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 TSC22D3Q99576 134 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 RSPO3Q9BXY4 272 aaPredicted RBP13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF350Q9GZX5 532 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 POLR2J3Q9H1A7 115 aaKnown RBP13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF768Q9H5H4 540 aaKnown RBP13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 CLCA3PQ9Y6N3 262 aa13.5□□□□□ -0.25
SHCBP1-201ENST00000303383 A0A1W2PRQ8 180 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 C17orf105B2RV13 164 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 CBLP22681 906 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 DUSP8Q13202 625 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 DGCR6Q14129 220 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 NNATQ16517 81 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 PERM1Q5SV97 790 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 PODNL1Q6PEZ8 512 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF730Q6ZMV8 503 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 MAML2Q8IZL2 1156 aaPredicted RBP13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 RCBTB1Q8NDN9 531 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF578Q96N58 590 aaPredicted RBP13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 OR1F2PQ96R84 312 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 PRR14Q9BWN1 585 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 FBXO4Q9UKT5 387 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 MMACHCQ9Y4U1 282 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 A0A1B0GX78 115 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 AGAP5A6NIR3 686 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 FUT4P22083 530 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 CNR2P34972 360 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 HOXD12P35452 270 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 TRAM2Q15035 370 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF836Q6ZNA1 936 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF540Q8NDQ6 660 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 ARHGDIGQ99819 225 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 NECTIN3Q9NQS3 549 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 AASSQ9UDR5 926 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 PRODH2Q9UF12 536 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 TGFBR3LH3BV60 316 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 DSCR3O14972 297 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 XPNPEP2O43895 674 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 CCDC159P0C7I6 412 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 RNF144AP50876 292 aaPredicted RBP13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 MAD2L1BPQ15013 274 aaPredicted RBP13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 SEC23BQ15437 767 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 OR4K5Q8NGD3 323 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 OR10A5Q9H207 317 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 ACAD8Q9UKU7 415 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 SRPK3Q9UPE1 567 aa13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 GPR55Q9Y2T6 319 aaPredicted RBP13.49□□□□□ -0.25
SHCBP1-201ENST00000303383 SH3PXD2BA1X283 911 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 CLDN24A6NM45 220 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 CYP7B1O75881 506 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 NKX2-2O95096 273 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 ZIC2O95409 532 aaPredicted RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 THBS1P07996 1170 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 SOX18P35713 384 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 GGT2P36268 569 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms