RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PLEKHA3Q9HB20 300 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 OR1A2Q9Y585 309 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 MTMR11A4FU01 709 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 OR6C74A6NCV1 312 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FMO6PO60774 539 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PRKCGP05129 697 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 CRABP1P29762 137 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 MAGEA3P43357 314 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 GPR4P46093 362 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 DLX5P56178 289 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 GRIN2CQ14957 1233 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 RGNQ15493 299 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 CD300LGQ6UXG3 332 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 LNX2Q8N448 690 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 DTWD1Q8N5C7 304 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 DPH2Q9BQC3 489 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 NRP1O14786 923 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FBLP22087 321 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 KCNQ1P51787 676 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 RRAS2P62070 204 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PRRT3Q5FWE3 981 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 C16orf78Q8WTQ4 265 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FUBP1Q96AE4 644 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 LRRC46Q96FV0 321 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SORT1Q99523 831 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FAM221BA6H8Z2 402 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 B4GALT2O60909 372 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 MTX2O75431 263 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 CDK4P11802 303 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SOX2P48431 317 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 MLC1Q15049 377 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 AAK1Q2M2I8 961 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM225Q6GV28 225 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 GPR149Q86SP6 731 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 OSTM1Q86WC4 334 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SUMF2Q8NBJ7 301 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 STK35Q8TDR2 534 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PGAP3Q96FM1 320 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ZBED3Q96IU2 234 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SLC38A1Q9H2H9 487 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 RLIMQ9NVW2 624 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 TRBV23OR9-2A0A075B6M9 112 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SMIM30A4D0T7 59 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 GBAP04062 536 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 C8orf89P0DMQ9 161 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 WASP42768 502 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 GLO1Q04760 184 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 OR56B4Q8NH76 319 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ADAMTS14Q8WXS8 1223 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 EMC7Q9NPA0 242 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 CACNA1CQ13936 2221 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PCM1Q15154 2024 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 TUBGCP6Q96RT7 1819 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 A0A0D9SEW6 157 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 RNF212BA8MTL3 300 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 H7BY64 318 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TRAPPC6AO75865 159 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 RAB3AP20336 220 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 EVI2BP34910 448 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OLIG2Q13516 323 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 C15orf39Q6ZRI6 1047 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 B3GNT7Q8NFL0 401 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GPR148Q8TDV2 347 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TANKQ92844 425 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 PRAP1Q96NZ9 151 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ARNTLO00327 626 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 CNR2P34972 360 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 CREB3L2Q70SY1 520 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 RPS27LQ71UM5 84 aaKnown RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF619Q8N2I2 560 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OR4K5Q8NGD3 323 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF442Q9H7R0 627 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 FBRSL1Q9HCM7 1045 aaKnown RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 KCNJ16Q9NPI9 418 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 QPCTLQ9NXS2 382 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GMEB2Q9UKD1 530 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 MEN1O00255 615 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 KHNYNO15037 678 aaKnown RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SCAF4O95104 1147 aaKnown RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 NDUFB2O95178 105 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GAAP10253 952 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 DDCP20711 480 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 IL32P24001 234 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 RABGGTBP53611 331 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 PIGFQ07326 219 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GALEQ14376 348 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 PPA1Q15181 289 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 RBMS2Q15434 407 aaKnown RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 C14orf28Q4W4Y0 310 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 AGAP7PQ5VUJ5 663 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ELP2Q6IA86 826 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 S100A7AQ86SG5 101 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SPARTQ8N0X7 666 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SLC5A8Q8N695 610 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 LIN37Q96GY3 246 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SLC12A9Q9BXP2 914 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SLC35A3Q9Y2D2 325 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SOD2P04179 222 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 PPP3CBP16298 524 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 CRHBPP24387 322 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms