RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ALPPP05187 535 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 DRD2P14416 443 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 ATP5A1P25705 553 aaKnown RBP22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 MAT2AP31153 395 aaKnown RBP22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 AHRP35869 848 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 OMPP47874 163 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 NDUFA9Q16795 377 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 MINDY4Q4G0A6 757 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 ABHD17CQ6PCB6 329 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 ADAMTSL4Q6UY14 1074 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 C16orf62Q7Z3J2 963 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 NANOGNBQ7Z5D8 188 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 OR52E1Q8NGJ3 308 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 OR51G2Q8NGK0 314 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 NEIL3Q8TAT5 605 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 SPATA5L1Q9BVQ7 753 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 APOBEC3BQ9UH17 382 aaKnown RBP22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 GSTK1Q9Y2Q3 226 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 LOC102723532A0A0G2JNH3 316 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 DDX5P17844 614 aaKnown RBP22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 RGS8P57771 180 aaPredicted RBP22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 ZNF155Q12901 538 aaPredicted RBP22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 FGL2Q14314 439 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 RNLSQ5VYX0 342 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 GNPDA2Q8TDQ7 276 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 SLX1AQ9BQ83 275 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 BCL2L10Q9HD36 194 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 FGF20Q9NP95 211 aaPredicted RBP22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 GPSM3Q9Y4H4 160 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 A0A1W2PP55 124 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 TMEM129A0AVI4 362 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 FAM172BPA6NC97 362 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 OR6C70A6NIJ9 312 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 RAB28P51157 221 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 IRF4Q15306 451 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 NDUFA5Q16718 116 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 TRIQKQ629K1 86 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 FAM111BQ6SJ93 734 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 PLEKHM3Q6ZWE6 761 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 ZNF438Q7Z4V0 828 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 FAM181AQ8N9Y4 354 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 DIO2Q92813 273 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 SNX18Q96RF0 628 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 PINK1Q9BXM7 581 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 PCBD2Q9H0N5 130 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 WDR26Q9H7D7 661 aa22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 SPTBN5Q9NRC6 3674 aaKnown RBP22.83■■□□□ 1.25
SPTSSA-201ENST00000298130 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 DNAJB6O75190 326 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 GABRA5P31644 462 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 ID2Q02363 134 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 TSPAN31Q12999 210 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 QPRTQ15274 297 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 TATDN3Q17R31 274 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 RDH10Q8IZV5 341 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 GDPD1Q8N9F7 314 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 C19orf18Q8NEA5 215 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 SAMD8Q96LT4 415 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 LIPT1Q9Y234 373 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 KNL1Q8NG31 2342 aa22.83■■□□□ 1.24
SPTSSA-201ENST00000298130 PTPRSQ13332 1948 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 A0A0G2JPF8 293 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 HNRNPCL2B2RXH8 293 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 HNRNPCL3B7ZW38 293 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 GABRPO00591 440 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 HNRNPCL4P0DMR1 293 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 MYOGP15173 224 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 GSTM3P21266 225 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 BTN3A2P78410 334 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 TRAM2Q15035 370 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 CPOQ8IVL8 374 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 SIRT6Q8N6T7 355 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 SMG7Q92540 1137 aaKnown RBP22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 MCHR1Q99705 422 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 ATF6BQ99941 703 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 ENKD1Q9H0I2 346 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 GIMAP4Q9NUV9 329 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 MDC1Q14676 2089 aaKnown RBP22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 STK25O00506 426 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 MLC1Q15049 377 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 SLC25A30Q5SVS4 291 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 FAM27D1Q5T7N8 215 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 LCN1P1Q5VSP4 162 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 FCRLBQ6BAA4 426 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 NOXA1Q86UR1 476 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 IL17RCQ8NAC3 791 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 ELP4Q96EB1 424 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 RNF170Q96K19 258 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 ADAM29Q9UKF5 820 aa22.82■■□□□ 1.24
SPTSSA-201ENST00000298130 MYO15AQ9UKN7 3530 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 LTBP2Q14767 1821 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 C1QTNF3-AMACRE9PGA6 284 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 CSNK2A2P19784 350 aaPredicted RBP22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 SNRPD2P62316 118 aaKnown RBP22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 LRRC32Q14392 662 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 ARHGEF6Q15052 776 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 AGERQ15109 404 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 PLET1Q6UQ28 207 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 PIGXQ8TBF5 258 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 SLC35A4Q96G79 324 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms