RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CD300CQ08708 224 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 TTC23Q5W5X9 447 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 TYW3Q6IPR3 259 aaKnown RBP14.47□□□□□ -0.09
LSM6-201ENST00000296581 TCTN3Q6NUS6 607 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 CCDC74BQ96LY2 380 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 WFDC6Q9BQY6 131 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 LMF2Q9BU23 707 aaKnown RBP14.47□□□□□ -0.09
LSM6-201ENST00000296581 ZNF350Q9GZX5 532 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 ARRDC1-AS1Q9H2J1 176 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 ACAD8Q9UKU7 415 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 SRPK3Q9UPE1 567 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 ORC6Q9Y5N6 252 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 FFAR1O14842 300 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 SEMA7AO75326 666 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 AK1P00568 194 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 FBLP22087 321 aaKnown RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 EMDP50402 254 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 KCNAB2Q13303 367 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 ZNF311Q5JNZ3 666 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 VASH1Q7L8A9 365 aaPredicted RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 LACC1Q8IV20 430 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 ZG16BQ96DA0 208 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 PSD2Q9BQI7 771 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 SAP130Q9H0E3 1048 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 QRSL1Q9H0R6 528 aaKnown RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 MTHFD2LQ9H903 347 aaPredicted RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 PRELID1Q9Y255 219 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 SLC9A8Q9Y2E8 581 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 WDR45Q9Y484 360 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 IGKV3D-11A0A0A0MRZ8 115 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 CLIC3O95833 236 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 ITGAMP11215 1152 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 PRKAR1BP31321 381 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 FUT7Q11130 342 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 EXOC3L2Q2M3D2 409 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 DCST2Q5T1A1 773 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 RHBDD2Q6NTF9 364 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 DBX2Q6ZNG2 339 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 QSOX2Q6ZRP7 698 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 HMGN2P46Q86SG4 172 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 RBM45Q8IUH3 476 aaKnown RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 COX18Q8N8Q8 333 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 RCBTB1Q8NDN9 531 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 PIK3C3Q8NEB9 887 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 CHPT1Q8WUD6 406 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 EFHD2Q96C19 240 aaPredicted RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 TRIM45Q9H8W5 580 aaPredicted RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 SIDT1Q9NXL6 827 aaKnown RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 RBMX2Q9Y388 322 aaKnown RBP14.46□□□□□ -0.09
LSM6-201ENST00000296581 SEC16AO15027 2179 aa14.46□□□□□ -0.09
LSM6-201ENST00000296581 HRKO00198 91 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 TNFRSF10AO00220 468 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 NTN3O00634 580 aaPredicted RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 KHNYNO15037 678 aaKnown RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 SLC16A6O15403 523 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 MITFO75030 526 aaPredicted RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 GADD45GO95257 159 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ZNF155Q12901 538 aaPredicted RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 NDUFA5Q16718 116 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 MICAQ29983 383 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ZC3H14Q6PJT7 736 aaKnown RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 VRK2Q86Y07 508 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 SLITRK4Q8IW52 837 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 C7orf57Q8NEG2 295 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ZNF555Q8NEP9 628 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 OR52P1PQ8NH57 321 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 VANGL1Q8TAA9 524 aaPredicted RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 PLEKHA8Q96JA3 519 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 PTCHD1Q96NR3 888 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ARHGDIGQ99819 225 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 SYNDIG1Q9H7V2 258 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 FOLH1BQ9HBA9 442 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 QPCTLQ9NXS2 382 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 TMA7Q9Y2S6 64 aaKnown RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 CHST2Q9Y4C5 530 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 PCDHGB2Q9Y5G2 931 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 M0R3H8 397 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 SSTR4P31391 388 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 PIGAP37287 484 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 GSSP48637 474 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ATP1A4Q13733 1029 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ZNF267Q14586 743 aaPredicted RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 GANABQ14697 944 aaKnown RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 ZNF829Q3KNS6 432 aaPredicted RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 COLEC12Q5KU26 742 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 PLA2G2CQ5R387 149 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 TCEAL6Q6IPX3 200 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 DEF8Q6ZN54 512 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 OFCC1Q8IZS5 231 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ATG16L2Q8NAA4 619 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 OR10G2Q8NGC3 310 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 OR52J3Q8NH60 311 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 GPR151Q8TDV0 419 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 PIK3R3Q92569 461 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 PMM1Q92871 262 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 TCEAL3Q969E4 200 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 CNDP2Q96KP4 475 aaKnown RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 VSTM2LQ96N03 204 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 GFM1Q96RP9 751 aaKnown RBP14.45□□□□□ -0.1
LSM6-201ENST00000296581 POLE3Q9NRF9 147 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms