RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FAM46AQ96IP4 442 aaKnown RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 ZBP1Q9H171 429 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 RETREG1Q9H6L5 497 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 PSORS1C1Q9UIG5 152 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 FBXL3Q9UKT7 428 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 H3BNC9 293 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 TP53I11O14683 189 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 CD3GP09693 182 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 PCSK2P16519 638 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 CBLP22681 906 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 CHMP24386 653 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SLC6A9P48067 706 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SLC7A9P82251 487 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 RIN1Q13671 783 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 EIPR1Q53HC9 387 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 FIGLAQ6QHK4 219 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 PARM1Q6UWI2 310 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 OR52N2Q8NGI0 321 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 OR8S1Q8NH09 359 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 DYNC2LI1Q8TCX1 351 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 CAMK1GQ96NX5 476 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 PHF7Q9BWX1 381 aaPredicted RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 TBX21Q9UL17 535 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 WDR45Q9Y484 360 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 LAMB1P07942 1786 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 FAAHO00519 579 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 KCNK5O95279 499 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ZNF806P0C7X5 589 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 C1GALT1C1LP0DN25 315 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 PITPNAQ00169 270 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 SLAMF1Q13291 335 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 HYAL4Q2M3T9 481 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 LHX8Q68G74 356 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 XKRXQ6PP77 449 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 OR5D16Q8NGK9 328 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 DAZLQ92904 295 aaKnown RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 CMKLR1Q99788 373 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 CTRCQ99895 268 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 ARL6Q9H0F7 186 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 OR10A4Q9H209 315 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 GNG8Q9UK08 70 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 HCRTR2O43614 444 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 PEPDP12955 493 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 SPNP16150 400 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 MRPS21P82921 87 aaKnown RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 ZNF91Q05481 1191 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 CAMK1Q14012 370 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 CTF1Q16619 201 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 XAF1Q6GPH4 301 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ALKAL1Q6UXT8 129 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ZNF782Q6ZMW2 699 aaPredicted RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 OLIG3Q7RTU3 272 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 PDZD3Q86UT5 571 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 CYB561A3Q8NBI2 242 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 VN1R2Q8NFZ6 395 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 CHFRQ96EP1 664 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 C11orf54Q9H0W9 315 aaPredicted RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 SLA2Q9H6Q3 261 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 MARCH5Q9NX47 278 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 UBQLN2Q9UHD9 624 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 TOGARAM1Q9Y4F4 1720 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 OR2A25A4D2G3 310 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ICMTO60725 284 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 GASTP01350 101 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 DBIP07108 87 aaKnown RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 GBX2P52951 348 aaPredicted RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 VEZF1Q14119 521 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 PDSS1Q5T2R2 415 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 MEDAGQ5VYS4 303 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 PARS2Q7L3T8 475 aaKnown RBP12.69□□□□□ -0.38
HPS3-201ENST00000296051 ZNF676Q8N7Q3 588 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 TXNDC15Q96J42 360 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 CD180Q99467 661 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 PLCL2Q9UPR0 1127 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 SVILO95425 2214 aa12.69□□□□□ -0.38
HPS3-201ENST00000296051 A0A1W2PRQ8 180 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 POM121CA8CG34 1229 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 IFNA6P05013 189 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 UQCRC2P22695 453 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 RPS19P39019 145 aaKnown RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 PRKCDQ05655 676 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 BOLLQ8N9W6 283 aaKnown RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 OR2AJ1Q8NGZ0 328 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 OR4K3Q96R72 315 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 VNN3Q9NY84 501 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 ZNF318Q5VUA4 2279 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 ACVR2AP27037 513 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 HOXD9P28356 352 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 ZNF41P51814 821 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 SIM1P81133 766 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 SP140Q13342 867 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms