RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CNPY4Q8N129 248 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 NINJ1Q92982 152 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 WNT2BQ93097 391 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 FOXC2Q99958 501 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 GRID1Q9ULK0 1009 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 RPH3AQ9Y2J0 694 aaPredicted RBP22.85■■□□□ 1.25
U2AF1-201ENST00000291552 HCRTR2O43614 444 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 SLITRK5O94991 958 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 NTSP30990 170 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 IKBIPQ70UQ0 350 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 OR2M3Q8NG83 312 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 INTS12Q96CB8 462 aaKnown RBP22.84■■□□□ 1.25
U2AF1-201ENST00000291552 ELP4Q96EB1 424 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 RMND5BQ96G75 393 aaPredicted RBP22.84■■□□□ 1.25
U2AF1-201ENST00000291552 ZFP3Q96NJ6 502 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 TM9SF2Q99805 663 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 SFXN3Q9BWM7 321 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 PLEKHA6Q9Y2H5 1048 aa22.84■■□□□ 1.25
U2AF1-201ENST00000291552 TUBAL3A6NHL2 446 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 NPIPB8E9PQR5 432 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 H3BQF6 201 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 TGM6O95932 706 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 UROSP10746 265 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 EPXP11678 715 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 CPA3P15088 417 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 PRPH2P23942 346 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 CHMP24386 653 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 CLDN15P56746 228 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 GAB1Q13480 694 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 CFAP157Q5JU67 520 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 AAGABQ6PD74 315 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 KIF18BQ86Y91 864 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 EIF1ADQ8N9N8 165 aaKnown RBP22.83■■□□□ 1.25
U2AF1-201ENST00000291552 OR4K17Q8NGC6 315 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 OR2T11Q8NH01 316 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 UBLCP1Q8WVY7 318 aaPredicted RBP22.83■■□□□ 1.25
U2AF1-201ENST00000291552 LMF2Q9BU23 707 aaKnown RBP22.83■■□□□ 1.25
U2AF1-201ENST00000291552 DSN1Q9H410 356 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 RRAGDQ9NQL2 400 aaPredicted RBP22.83■■□□□ 1.25
U2AF1-201ENST00000291552 DDX18Q9NVP1 670 aaKnown RBP22.83■■□□□ 1.25
U2AF1-201ENST00000291552 GALNT8Q9NY28 637 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 PPP4R1LQ9P1A2 415 aa22.83■■□□□ 1.25
U2AF1-201ENST00000291552 WBP11Q9Y2W2 641 aaKnown RBP22.83■■□□□ 1.25
U2AF1-201ENST00000291552 CRCPO75575 148 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 MRPS22P82650 360 aaKnown RBP22.82■■□□□ 1.24
U2AF1-201ENST00000291552 PCLAFQ15004 111 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 CYP27C1Q4G0S4 372 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 LIPMQ5VYY2 423 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 ANKRD26P1Q6NSI1 321 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 ZNF551Q7Z340 670 aaPredicted RBP22.82■■□□□ 1.24
U2AF1-201ENST00000291552 LUZP2Q86TE4 346 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 C4orf33Q8N1A6 199 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 FCRL1Q96LA6 429 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 RBM24Q9BX46 236 aaKnown RBP22.82■■□□□ 1.24
U2AF1-201ENST00000291552 TUBB1Q9H4B7 451 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 MED11Q9P086 117 aa22.82■■□□□ 1.24
U2AF1-201ENST00000291552 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 COPEO14579 308 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 TNFSF13O75888 250 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 CCT5P48643 541 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 DSCR4P56555 118 aaPredicted RBP22.81■■□□□ 1.24
U2AF1-201ENST00000291552 SLC18A2Q05940 514 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 STX5Q13190 355 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 ZNF385BQ569K4 471 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 Q6ZSR9 355 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 C10orf107Q8IVU9 208 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 GFM2Q969S9 779 aaKnown RBP22.81■■□□□ 1.24
U2AF1-201ENST00000291552 TMUB1Q9BVT8 246 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 ABCG2Q9UNQ0 655 aa22.81■■□□□ 1.24
U2AF1-201ENST00000291552 NUP214P35658 2090 aaPredicted RBP22.81■■□□□ 1.24
U2AF1-201ENST00000291552 A0A1W2PNV4 684 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 GXYLT2A0PJZ3 443 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 H0YC42 278 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 SEC22BO75396 215 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 IL33O95760 270 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 IGKV1D-16P01601 117 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 IFI6P09912 130 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 KRT4P19013 534 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 TPD52P55327 224 aaPredicted RBP22.8■■□□□ 1.24
U2AF1-201ENST00000291552 DECR1Q16698 335 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 GRAMD2AQ8IUY3 354 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 CCDC63Q8NA47 563 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 HOXB13Q92826 284 aaPredicted RBP22.8■■□□□ 1.24
U2AF1-201ENST00000291552 CIDECQ96AQ7 238 aaPredicted RBP22.8■■□□□ 1.24
U2AF1-201ENST00000291552 METTL2AQ96IZ6 378 aaKnown RBP22.8■■□□□ 1.24
U2AF1-201ENST00000291552 GATA5Q9BWX5 397 aaPredicted RBP22.8■■□□□ 1.24
U2AF1-201ENST00000291552 PPCSQ9HAB8 311 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 LRTM1Q9HBL6 345 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 C1orf109Q9NX04 203 aa22.8■■□□□ 1.24
U2AF1-201ENST00000291552 FAM120CQ9NX05 1096 aaKnown RBP22.8■■□□□ 1.24
U2AF1-201ENST00000291552 PDPK1O15530 556 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 SDC1P18827 310 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 HK1P19367 917 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 MAP3K8P41279 467 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 HSPB3Q12988 150 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 BCL2A1Q16548 175 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 PAMR1Q6UXH9 720 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 APOOLQ6UXV4 268 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 MARCH3Q86UD3 253 aa22.79■■□□□ 1.24
U2AF1-201ENST00000291552 UBQLNLQ8IYU4 475 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms