RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 GIPRP48546 466 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 SNRPGP62308 76 aaKnown RBP17.98■□□□□ 0.47
BRAF-201ENST00000288602 ALDH6A1Q02252 535 aaKnown RBP17.98■□□□□ 0.47
BRAF-201ENST00000288602 PRICKLE4Q2TBC4 344 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 CLEC12AQ5QGZ9 265 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 PLEKHM3Q6ZWE6 761 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 ADCK1Q86TW2 530 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 ZNF687Q8N1G0 1237 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 LMX1AQ8TE12 382 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 SH3YL1Q96HL8 342 aaPredicted RBP17.98■□□□□ 0.47
BRAF-201ENST00000288602 MAP3K3Q99759 626 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 SEMA6CQ9H3T2 930 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 SLC2A4RGQ9NR83 387 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 KLHL28Q9NXS3 571 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 HCN3Q9P1Z3 774 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 NDOR1Q9UHB4 597 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 GPR52Q9Y2T5 361 aa17.98■□□□□ 0.47
BRAF-201ENST00000288602 KRBA1A5PL33 1030 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 AP3D1O14617 1153 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 CNOT3O75175 753 aaKnown RBP17.97■□□□□ 0.47
BRAF-201ENST00000288602 IDUAP35475 653 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 RELAQ04206 551 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 ERV3-1Q14264 604 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 SLC46A3Q7Z3Q1 461 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 CROCCP3Q8IVE0 287 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 PEX5LQ8IYB4 626 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 GPR151Q8TDV0 419 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 TMEM255BQ8WV15 326 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 ANKRD9Q96BM1 317 aaPredicted RBP17.97■□□□□ 0.47
BRAF-201ENST00000288602 BCL7BQ9BQE9 202 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 MAT2BQ9NZL9 334 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 IL20RAQ9UHF4 553 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 KCNE5Q9UJ90 142 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 PIP5K1CO60331 668 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 PRG2P13727 222 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 MAT1AQ00266 395 aaKnown RBP17.97■□□□□ 0.47
BRAF-201ENST00000288602 COX10Q12887 443 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 TRAM2Q15035 370 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 DCST2Q5T1A1 773 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 RRM2BQ7LG56 351 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 ARL14Q8N4G2 192 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 C19orf47Q8N9M1 422 aaKnown RBP17.97■□□□□ 0.47
BRAF-201ENST00000288602 OR8D4Q8NGM9 314 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 OR8J1Q8NGP2 316 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 TSSK6Q9BXA6 273 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 DCSTAMPQ9H295 470 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 PIGUQ9H490 435 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 CNOT2Q9NZN8 540 aaKnown RBP17.97■□□□□ 0.47
BRAF-201ENST00000288602 IFT52Q9Y366 437 aa17.97■□□□□ 0.47
BRAF-201ENST00000288602 GXYLT2A0PJZ3 443 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 CHST10O43529 356 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 SDC3O75056 442 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 APOL3O95236 402 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 GPR4P46093 362 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 RGS6P49758 472 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 MGAT2Q10469 447 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 ST3GAL3Q11203 375 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 FZD5Q13467 585 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 DGUOKQ16854 277 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 PAQR6Q6TCH4 344 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 GDF7Q7Z4P5 450 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 MCATQ8IVS2 390 aaKnown RBP17.96■□□□□ 0.47
BRAF-201ENST00000288602 METTL27Q8N6F8 245 aaPredicted RBP17.96■□□□□ 0.47
BRAF-201ENST00000288602 TMCO5AQ8N6Q1 288 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 COX18Q8N8Q8 333 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 FNDC8Q8TC99 324 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 CDCA4Q9BXL8 241 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 ANKHQ9HCJ1 492 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 TBC1D23Q9NUY8 699 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 DOLKQ9UPQ8 538 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 DBTP11182 482 aaKnown RBP17.96■□□□□ 0.47
BRAF-201ENST00000288602 PCYT1AP49585 367 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 RPS3AP61247 264 aaKnown RBP17.96■□□□□ 0.47
BRAF-201ENST00000288602 ZNF91Q05481 1191 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 NR1D2Q14995 579 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 SNAPC1Q16533 368 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 TSTQ16762 297 aaKnown RBP17.96■□□□□ 0.47
BRAF-201ENST00000288602 CD300LDQ6UXZ3 194 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 SNX29P2Q8IUI4 249 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 GALNT12Q8IXK2 581 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 SLC34A3Q8N130 599 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 SLC41A3Q96GZ6 507 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 MSANTD3Q96H12 275 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 LRR1Q96L50 414 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 CHCHD6Q9BRQ6 235 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 CENPOQ9BU64 300 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 SLC7A7Q9UM01 511 aa17.96■□□□□ 0.47
BRAF-201ENST00000288602 PCDH15Q96QU1 1955 aa17.96■□□□□ 0.46
BRAF-201ENST00000288602 CH25HO95992 272 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 ALOX5P09917 674 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 CD38P28907 300 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 GABRA3P34903 492 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 CDK5Q00535 292 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 MFSD4BQ5TF39 518 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 NRMQ8IXM6 262 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 Q96MT0 163 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 MGLLQ99685 303 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 SAP130Q9H0E3 1048 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 ZNF232Q9UNY5 417 aa17.95■□□□□ 0.46
BRAF-201ENST00000288602 COL6A3P12111 3177 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms