RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 HCFC2Q9Y5Z7 792 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 PLPP1O14494 284 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 SOCS6O14544 535 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 SLC2A10O95528 541 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 SHC1P29353 583 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 KCNJ5P48544 419 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 ERVK-21P61565 698 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 PRR5P85299 388 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 RAB40BQ12829 278 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 MPEG1Q2M385 716 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 ZCCHC10Q8TBK6 192 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 GRHL3Q8TE85 626 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 SMAP2Q8WU79 429 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 PDXPQ96GD0 296 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 NARS2Q96I59 477 aaKnown RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 GAL3ST1Q99999 423 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 WFDC6Q9BQY6 131 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 C12orf4Q9NQ89 552 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 SLC23A1Q9UHI7 598 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 RPN2P04844 631 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 GYPBP06028 91 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 PIPP12273 146 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 ZNF33BQ06732 778 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 PRPF38BQ5VTL8 546 aaKnown RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 VITQ6UXI7 678 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 MRPL43Q8N983 215 aaKnown RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 OR2T35Q8NGX2 323 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 CEP76Q8TAP6 659 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 TMEM163Q8TC26 289 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 GNPDA2Q8TDQ7 276 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 UCN3Q969E3 161 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 GAS2L1Q99501 681 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 POLDIP3Q9BY77 421 aaKnown RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 GSDMCQ9BYG8 508 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 MCOLN1Q9GZU1 580 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 NKX2-4Q9H2Z4 354 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 FAM86C2PA6NEL3 165 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 PROM1O43490 865 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 RFPL3O75679 317 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 OR7A10O76100 309 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 GABRA5P31644 462 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 SLC6A11P48066 632 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 AP2S1P53680 142 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 ZMYND11Q15326 602 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 ZNF805Q5CZA5 627 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 PXDC1Q5TGL8 231 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 LIPIQ6XZB0 460 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 RASSF6Q6ZTQ3 369 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 ANKRD33Q7Z3H0 272 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 UPRTQ96BW1 309 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 C1QTNF7Q9BXJ2 289 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 NANSQ9NR45 359 aa12.6□□□□□ -0.39
SCAF4-201ENST00000286835 EXO1Q9UQ84 846 aaKnown RBP12.6□□□□□ -0.39
SCAF4-201ENST00000286835 H0YC42 278 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 HMGN4O00479 90 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 LAMP2P13473 410 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 ELK1P19419 428 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 MVDP53602 400 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TSPAN5P62079 268 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 PRICKLE2Q7Z3G6 844 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TECPR1Q7Z6L1 1165 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 OOSP2Q86WS3 158 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 OR4N5Q8IXE1 308 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 FAM98AQ8NCA5 519 aaKnown RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 BBS1Q8NFJ9 593 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 OR4D11Q8NGI4 311 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 FKBP14Q9NWM8 211 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 SESN1Q9Y6P5 492 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 RLN1P04808 185 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CLDN2P57739 230 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CDKN3Q16667 212 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TMC8Q8IU68 726 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 ACBD7Q8N6N7 88 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TRMT10AQ8TBZ6 339 aaKnown RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TRIM43Q96BQ3 446 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 FOLH1BQ9HBA9 442 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 SLAMF7Q9NQ25 335 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TRIM36Q9NQ86 728 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 STOML2Q9UJZ1 356 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 SMAD9O15198 467 aaKnown RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 C1QBP02746 253 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 PRLHRP49683 370 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 SYT9Q86SS6 491 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 COMMD7Q86VX2 200 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 RDH10Q8IZV5 341 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 ZFPM2Q8WW38 1151 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 MED30Q96HR3 178 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 FUZQ9BT04 418 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CHD5Q8TDI0 1954 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 UBXN7O94888 489 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms